Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   OIY87_RS11950 Genome accession   NZ_CP113954
Coordinates   2391650..2392426 (+) Length   258 a.a.
NCBI ID   WP_269725044.1    Uniprot ID   -
Organism   Streptococcus gallolyticus strain XH2168     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2386650..2397426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIY87_RS11940 (OIY87_01285) rlmH 2389625..2390104 (-) 480 WP_009855220.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  OIY87_RS11945 (OIY87_01290) htrA 2390315..2391580 (+) 1266 WP_077497985.1 S1C family serine protease Regulator
  OIY87_RS11950 (OIY87_01295) spo0J 2391650..2392426 (+) 777 WP_269725044.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29682.45 Da        Isoelectric Point: 9.7762

>NTDB_id=763855 OIY87_RS11950 WP_269725044.1 2391650..2392426(+) (spo0J) [Streptococcus gallolyticus strain XH2168]
MPETLTLIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGERRLRASKIAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQG
HARVLLTLKNAEEQEKWYQKILTEDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTKGEV
SLHFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=763855 OIY87_RS11950 WP_269725044.1 2391650..2392426(+) (spo0J) [Streptococcus gallolyticus strain XH2168]
ATGCCTGAAACACTCACATTAATCAAAATTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
AGAGCTAGAAGAACTAGCACGTTCGATTAAAACTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCTGGTGAACGACGTCTAAGAGCCTCAAAAATAGCAGGTTTAACCGAAATTCCTGCTATCATAAAA
AATATCTCCAATCAGGAGAGTATGCAGCTAGCTATCGTTGAAAATTTGCAACGTTCTGATTTGAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAACTTCTGGAAAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGCCCCT
ACATTACCAATTGCCTCAGATTACTTAACCTTCCTAAAAGTCTCTCTGATGCCGTTGAAAAAGGTGAGCTGTCTCAAGGA
CACGCGCGTGTTCTTTTAACCCTTAAAAATGCTGAAGAACAAGAAAAGTGGTATCAAAAAATTCTGACAGAGGATATTAG
CGTTAGAAAACTTGAACATTTACTAAAACCTGCTAAAAAGAAAAAAAATCGTCCCAAAAAGAAAGATATTTTCATTCGAA
ATCAAGAAGAAGAATTGACCAAACAGTTAGGACTTCCTGTTAAAATTATCGTCTCTAAAACTGGCACAAAAGGAGAGGTG
AGTTTACATTTTCAATCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(149-196)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.533

99.612

0.593