Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QLQ05_RS06075 Genome accession   NZ_CP125762
Coordinates   1178245..1178955 (+) Length   236 a.a.
NCBI ID   WP_003229230.1    Uniprot ID   O34977
Organism   Bacillus subtilis strain KRS015     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1173245..1183955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS06055 ytfP 1173726..1174988 (-) 1263 WP_003229222.1 NAD(P)/FAD-dependent oxidoreductase -
  QLQ05_RS06060 murJ 1175190..1176824 (+) 1635 WP_003229224.1 lipid II flippase MurJ -
  QLQ05_RS06065 rsuA 1176893..1177612 (+) 720 WP_003229226.1 pseudouridine synthase -
  QLQ05_RS06070 ytzE 1177733..1177954 (-) 222 WP_003152337.1 DeoR family transcriptional regulator -
  QLQ05_RS06075 pptA 1178245..1178955 (+) 711 WP_003229230.1 ABC transporter ATP-binding protein Regulator
  QLQ05_RS06080 ythQ 1178952..1180109 (+) 1158 WP_003229232.1 ABC transporter permease -
  QLQ05_RS06085 pbuO 1180149..1181447 (-) 1299 WP_003229234.1 hypoxanthine/guanine permease PbuO -
  QLQ05_RS06090 pepV 1181544..1182935 (+) 1392 WP_004399126.1 dipeptidase PepV -
  QLQ05_RS06095 cysK 1182969..1183904 (-) 936 WP_003229237.1 cysteine synthase A -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26506.56 Da        Isoelectric Point: 5.3508

>NTDB_id=763849 QLQ05_RS06075 WP_003229230.1 1178245..1178955(+) (pptA) [Bacillus subtilis strain KRS015]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL

Nucleotide


Download         Length: 711 bp        

>NTDB_id=763849 QLQ05_RS06075 WP_003229230.1 1178245..1178955(+) (pptA) [Bacillus subtilis strain KRS015]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCAGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTTCACGGCATTGAAGAGAGTGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATGTTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432