Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QLQ05_RS00970 Genome accession   NZ_CP125762
Coordinates   177784..178473 (+) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain KRS015     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 172784..183473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS00950 iolG 173938..174972 (+) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  QLQ05_RS00955 iolH 174992..175861 (+) 870 WP_003243149.1 sugar phosphate isomerase/epimerase -
  QLQ05_RS00960 iolI 175947..176783 (+) 837 WP_003244546.1 2-keto-myo-inositol isomerase -
  QLQ05_RS00965 iolJ 176804..177676 (+) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  QLQ05_RS00970 braR 177784..178473 (+) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  QLQ05_RS00975 yxdK 178470..179447 (+) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  QLQ05_RS00980 yxdL 179591..180364 (+) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  QLQ05_RS00985 yxdM 180339..182207 (+) 1869 WP_003244410.1 ABC transporter permease YxdM -
  QLQ05_RS00990 yxeA 182221..182568 (+) 348 WP_003227084.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=763823 QLQ05_RS00970 WP_003243527.1 177784..178473(+) (braR) [Bacillus subtilis strain KRS015]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=763823 QLQ05_RS00970 WP_003243527.1 177784..178473(+) (braR) [Bacillus subtilis strain KRS015]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406