Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   OIY87_RS01960 Genome accession   NZ_CP113954
Coordinates   354874..355599 (+) Length   241 a.a.
NCBI ID   WP_009853437.1    Uniprot ID   A0A060RHE2
Organism   Streptococcus gallolyticus strain XH2168     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 349874..360599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIY87_RS01930 (OIY87_03225) - 350252..351673 (+) 1422 WP_009853431.1 NCS2 family permease -
  OIY87_RS01935 (OIY87_03230) tsaE 351858..352301 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  OIY87_RS01940 (OIY87_03235) - 352294..352806 (+) 513 WP_268732943.1 GNAT family N-acetyltransferase -
  OIY87_RS01945 (OIY87_03240) brpA 352817..353974 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  OIY87_RS01950 (OIY87_03245) - 354092..354394 (-) 303 WP_253042385.1 hypothetical protein -
  OIY87_RS01955 (OIY87_03250) - 354391..354810 (-) 420 WP_061459029.1 HIT family protein -
  OIY87_RS01960 (OIY87_03255) pptA 354874..355599 (+) 726 WP_009853437.1 ABC transporter ATP-binding protein Regulator
  OIY87_RS01965 (OIY87_03260) - 355601..356635 (+) 1035 WP_269725127.1 ABC transporter permease -
  OIY87_RS01970 (OIY87_03265) ccrZ 356700..357494 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  OIY87_RS01975 (OIY87_03270) trmB 357494..358132 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  OIY87_RS01985 (OIY87_03280) - 358475..359500 (+) 1026 WP_269725128.1 sensor domain-containing diguanylate cyclase -
  OIY87_RS01990 (OIY87_03285) - 359506..360573 (+) 1068 WP_039693972.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26751.00 Da        Isoelectric Point: 4.3757

>NTDB_id=763812 OIY87_RS01960 WP_009853437.1 354874..355599(+) (pptA) [Streptococcus gallolyticus strain XH2168]
MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQDQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=763812 OIY87_RS01960 WP_009853437.1 354874..355599(+) (pptA) [Streptococcus gallolyticus strain XH2168]
ATGTTAAAAATTGAAAATGTAACTGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATCGGACTTTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGGATCAGGCGGAATATCGTAAGAAAATCGGATTTATTCCA
GAAACGCCAAGTTTATATGAAGAACTGACTTTACGTGAACATTTAGAAACGGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTCAATCCAAGTTTGTTTATCGTTGATGAACCCTTT
TTGGGATTGGACCCATTAGCGATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGCAAATTCGTGCGACTG
GTACATTAGCAGAGCTACGTGAAGCTTTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060RHE2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

80.335

99.17

0.797
  pptA Streptococcus thermophilus LMD-9

79.916

99.17

0.793