Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   OZX61_RS10930 Genome accession   NZ_CP113932
Coordinates   2270763..2271086 (-) Length   107 a.a.
NCBI ID   WP_195771581.1    Uniprot ID   -
Organism   Acinetobacter sp. ESL0695     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2265763..2276086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZX61_RS10890 (OZX61_10890) tuf 2265765..2266955 (-) 1191 WP_195771585.1 elongation factor Tu -
  OZX61_RS10915 (OZX61_10915) trpE 2267618..2269111 (-) 1494 WP_277094788.1 anthranilate synthase component I -
  OZX61_RS10920 (OZX61_10920) - 2269208..2269873 (-) 666 WP_195771583.1 phosphoglycolate phosphatase -
  OZX61_RS10925 (OZX61_10925) - 2269928..2270530 (-) 603 WP_277094789.1 FHA domain-containing protein -
  OZX61_RS10930 (OZX61_10930) hns 2270763..2271086 (-) 324 WP_195771581.1 H-NS histone family protein Regulator
  OZX61_RS10935 (OZX61_10935) - 2271412..2272611 (-) 1200 WP_277094790.1 heme biosynthesis protein HemY -
  OZX61_RS10940 (OZX61_10940) - 2272623..2273495 (-) 873 WP_195771579.1 hypothetical protein -
  OZX61_RS10945 (OZX61_10945) - 2273495..2274265 (-) 771 WP_277094791.1 uroporphyrinogen-III synthase -
  OZX61_RS10950 (OZX61_10950) hemC 2274270..2275190 (-) 921 WP_277094792.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 107 a.a.        Molecular weight: 12278.91 Da        Isoelectric Point: 5.9049

>NTDB_id=763631 OZX61_RS10930 WP_195771581.1 2270763..2271086(-) (hns) [Acinetobacter sp. ESL0695]
MQDISTLSVDELKHLQQEAEALIATKKDKAIQDAYQQIIDIASSLDLSVEEVLEYGAQKRKVTTRKTVEPRYRNYNNTEQ
TWTGRGKQPRWLVAELAKGAKLEDFLI

Nucleotide


Download         Length: 324 bp        

>NTDB_id=763631 OZX61_RS10930 WP_195771581.1 2270763..2271086(-) (hns) [Acinetobacter sp. ESL0695]
GTGCAAGATATTAGTACATTAAGTGTGGATGAACTAAAACATTTACAACAAGAAGCTGAAGCATTAATTGCGACAAAAAA
AGATAAAGCGATTCAAGATGCTTATCAGCAAATCATTGATATCGCATCATCATTAGATCTTTCTGTTGAAGAAGTTTTAG
AATATGGCGCGCAAAAACGTAAGGTTACAACACGTAAAACTGTTGAACCGCGCTATCGCAACTATAATAATACTGAGCAA
ACATGGACGGGTCGTGGTAAGCAACCACGCTGGTTGGTGGCTGAGTTAGCAAAAGGTGCAAAATTAGAAGACTTTCTAAT
CTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(11-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

77.143

98.131

0.757