Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OY559_RS15430 Genome accession   NZ_CP113783
Coordinates   3253910..3254311 (-) Length   133 a.a.
NCBI ID   WP_055940451.1    Uniprot ID   A0A543DC45
Organism   Pseudoxanthomonas sp. SE1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3248910..3259311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OY559_RS15420 (OY559_15430) - 3251254..3253290 (-) 2037 WP_277727089.1 methyl-accepting chemotaxis protein -
  OY559_RS15425 (OY559_15435) - 3253325..3253855 (-) 531 WP_185742153.1 chemotaxis protein CheW -
  OY559_RS15430 (OY559_15440) pilG 3253910..3254311 (-) 402 WP_055940451.1 response regulator Regulator
  OY559_RS15435 (OY559_15445) gshB 3254554..3255498 (+) 945 WP_277727090.1 glutathione synthase -
  OY559_RS15440 (OY559_15450) - 3255500..3256375 (+) 876 WP_277727091.1 energy transducer TonB -
  OY559_RS15445 (OY559_15455) tsaB 3256387..3257127 (-) 741 WP_277727092.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  OY559_RS15450 (OY559_15460) - 3257183..3259228 (-) 2046 WP_277727093.1 ATP-dependent DNA helicase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14800.06 Da        Isoelectric Point: 7.1357

>NTDB_id=763042 OY559_RS15430 WP_055940451.1 3253910..3254311(-) (pilG) [Pseudoxanthomonas sp. SE1]
MTQNEGQAGGLHGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
NNQVFKSTPVIMLSSKDSLFDKARGRIVGSEQYLTKPFTREELLDAIRAHVST

Nucleotide


Download         Length: 402 bp        

>NTDB_id=763042 OY559_RS15430 WP_055940451.1 3253910..3254311(-) (pilG) [Pseudoxanthomonas sp. SE1]
ATGACGCAGAACGAAGGCCAGGCCGGTGGACTCCACGGCCTACGGGTCATGGTGATCGATGACTCGAAAACGATCCGCCG
CACCGCGGAAACCCTGCTCAAACGCGAGGGTTGCGAAGTCGTGACCGCGACGGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGCCTGGACGGGTATCAGACCTGCGCGCTGATCAAG
AACAACCAGGTGTTCAAGTCCACGCCGGTCATCATGCTGTCGTCCAAGGACAGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCGTTCACGCGCGAGGAACTCCTCGACGCCATCCGCGCCCACGTCAGCACCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A543DC45

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.233

0.692