Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   OXV07_RS14465 Genome accession   NZ_CP113536
Coordinates   2922459..2923064 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain ZCX     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2917459..2928064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OXV07_RS14450 helD 2917676..2919730 (-) 2055 WP_000420505.1 DNA helicase IV -
  OXV07_RS14455 - 2919854..2920300 (+) 447 WP_001261222.1 YccF domain-containing protein -
  OXV07_RS14460 yccS 2920319..2922472 (+) 2154 WP_000950880.1 YccS family putative transporter -
  OXV07_RS14465 sxy/tfoX 2922459..2923064 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  OXV07_RS14470 sulA 2923281..2923790 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  OXV07_RS14475 ompA 2924147..2925199 (+) 1053 WP_001674965.1 porin OmpA -
  OXV07_RS14480 matP 2925271..2925723 (-) 453 WP_054175603.1 macrodomain Ter protein MatP -
  OXV07_RS14485 - 2925909..2927669 (+) 1761 WP_000156453.1 AAA family ATPase -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=762893 OXV07_RS14465 WP_001202375.1 2922459..2923064(-) (sxy/tfoX) [Salmonella enterica strain ZCX]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=762893 OXV07_RS14465 WP_001202375.1 2922459..2923064(-) (sxy/tfoX) [Salmonella enterica strain ZCX]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751