Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OU809_RS09975 Genome accession   NZ_CP113516
Coordinates   1978267..1978743 (+) Length   158 a.a.
NCBI ID   WP_130569497.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain 285-3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1973267..1983743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OU809_RS09950 (OU809_09950) - 1974385..1975362 (+) 978 WP_020451563.1 alpha/beta hydrolase family protein -
  OU809_RS09955 (OU809_09955) - 1975423..1975650 (+) 228 WP_023857612.1 hypothetical protein -
  OU809_RS09960 (OU809_09960) - 1976346..1976942 (+) 597 WP_020451565.1 SAM-dependent methyltransferase -
  OU809_RS09965 (OU809_09965) - 1977048..1977530 (+) 483 WP_130569492.1 DUF4944 domain-containing protein -
  OU809_RS09970 (OU809_09970) - 1977564..1978136 (+) 573 WP_023857608.1 GNAT family N-acetyltransferase -
  OU809_RS09975 (OU809_09975) rok 1978267..1978743 (+) 477 WP_130569497.1 hypothetical protein Regulator
  OU809_RS09980 (OU809_09980) - 1978863..1979036 (+) 174 WP_165389276.1 hypothetical protein -
  OU809_RS09985 (OU809_09985) - 1979389..1980009 (-) 621 WP_026579659.1 hypothetical protein -
  OU809_RS09990 (OU809_09990) - 1980570..1981154 (+) 585 WP_020451571.1 TetR family transcriptional regulator -
  OU809_RS09995 (OU809_09995) - 1981235..1981567 (+) 333 WP_020451572.1 DMT family transporter -
  OU809_RS10000 (OU809_10000) - 1981570..1981887 (+) 318 WP_020451573.1 DMT family transporter -
  OU809_RS10005 (OU809_10005) speG 1981916..1982458 (+) 543 WP_020451574.1 spermidine N1-acetyltransferase -
  OU809_RS10010 (OU809_10010) - 1982495..1982821 (-) 327 WP_217626321.1 YxeA family protein -
  OU809_RS10015 (OU809_10015) - 1983031..1983471 (+) 441 WP_039072735.1 hypothetical protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18313.17 Da        Isoelectric Point: 9.8473

>NTDB_id=762603 OU809_RS09975 WP_130569497.1 1978267..1978743(+) (rok) [Bacillus paralicheniformis strain 285-3]
MFDEREALRLRLEQLGDAEIQVMRELRKERQDIYSKLRELDQESDPAINKKSSLIDLASAAAEELKQSQIAVDKHPPIKT
PSHTIFQSKTTIQREAALNILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILQKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=762603 OU809_RS09975 WP_130569497.1 1978267..1978743(+) (rok) [Bacillus paralicheniformis strain 285-3]
ATGTTCGACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATTCAGGTGATGCGGGAATTGCG
GAAAGAACGACAAGACATTTATTCGAAGCTGCGTGAATTGGATCAGGAGAGTGATCCCGCAATTAACAAAAAATCTTCAT
TAATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAGATTGCCGTTGACAAACATCCACCCATCAAAACT
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGTGAGGCTGCCTTAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACAACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAACCTGCCCGCGGCCATTATATTTTGCAAAAAGAAAAAGACCTTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

42.857

100

0.494