Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OVA33_RS17655 Genome accession   NZ_CP113515
Coordinates   3549056..3549652 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus sp. KICET-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3544056..3554652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OVA33_RS17630 (OVA33_17635) mobB 3544432..3544953 (-) 522 WP_063636610.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  OVA33_RS17635 (OVA33_17640) glp 3544914..3546206 (-) 1293 WP_063636609.1 gephyrin-like molybdotransferase Glp -
  OVA33_RS17640 (OVA33_17645) - 3546224..3547243 (-) 1020 WP_065180237.1 molybdopterin-synthase adenylyltransferase MoeB -
  OVA33_RS17645 (OVA33_17650) - 3547295..3547897 (-) 603 WP_063636607.1 molybdenum cofactor guanylyltransferase -
  OVA33_RS17650 (OVA33_17655) - 3548043..3549035 (+) 993 WP_014417619.1 hypothetical protein -
  OVA33_RS17655 (OVA33_17660) rok 3549056..3549652 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  OVA33_RS17660 (OVA33_17665) - 3550104..3550562 (-) 459 WP_025649508.1 TlpA disulfide reductase family protein -
  OVA33_RS17665 (OVA33_17670) - 3550850..3551656 (+) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  OVA33_RS17670 (OVA33_17675) - 3551690..3551935 (-) 246 WP_003154596.1 YkuS family protein -
  OVA33_RS17675 (OVA33_17680) - 3551996..3553120 (-) 1125 WP_063636606.1 N-acetyldiaminopimelate deacetylase -
  OVA33_RS17680 (OVA33_17685) dapD 3553191..3553901 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  OVA33_RS17685 (OVA33_17690) - 3553983..3554438 (-) 456 WP_014417614.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=762552 OVA33_RS17655 WP_003154591.1 3549056..3549652(-) (rok) [Bacillus sp. KICET-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=762552 OVA33_RS17655 WP_003154591.1 3549056..3549652(-) (rok) [Bacillus sp. KICET-1]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843