Detailed information NTG0762508

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: OVA33_RS06385
• Genome accession: NZ_CP113515
• Coordinates: 1244145..1245290 (-)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus sp. KICET-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1239145..1250290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OVA33_RS06360 (OVA33_06365)	-	1239429..1239860 (+)	432	WP_017418704.1	hypothetical protein	-
OVA33_RS06365 (OVA33_06370)	-	1239885..1241957 (-)	2073	WP_106067806.1	transglycosylase domain-containing protein	-
OVA33_RS06370 (OVA33_06375)	speE	1242157..1242987 (+)	831	WP_003151052.1	spermidine synthase	-
OVA33_RS06375 (OVA33_06380)	speB	1243047..1243919 (+)	873	WP_003151054.1	agmatinase	-
OVA33_RS06380 (OVA33_06385)	-	1244042..1244161 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
OVA33_RS06385 (OVA33_06390)	rapF	1244145..1245290 (-)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
OVA33_RS06390 (OVA33_06395)	-	1245582..1246010 (+)	429	WP_014419128.1	DUF1934 family protein	-
OVA33_RS06395 (OVA33_06400)	argS	1246007..1247677 (+)	1671	WP_025649385.1	arginine--tRNA ligase	-
OVA33_RS06400 (OVA33_06405)	narK	1247812..1249002 (+)	1191	WP_017418712.1	nitrate transporter NarK	-
OVA33_RS06405 (OVA33_06410)	fnr	1249100..1249816 (+)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=762508 OVA33_RS06385 WP_017418708.1 1244145..1245290(-) (rapF) [Bacillus sp. KICET-1]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=762508 OVA33_RS06385 WP_017418708.1 1244145..1245290(-) (rapF) [Bacillus sp. KICET-1]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533