Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   OVA33_RS02525 Genome accession   NZ_CP113515
Coordinates   483791..483910 (-) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus sp. KICET-1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 478791..488910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OVA33_RS02500 (OVA33_02500) - 479030..479788 (-) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  OVA33_RS02505 (OVA33_02505) - 479782..480729 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  OVA33_RS02510 (OVA33_02510) ceuB 480719..481672 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  OVA33_RS02515 (OVA33_02515) - 482086..483450 (+) 1365 WP_025649998.1 aspartate kinase -
  OVA33_RS02520 (OVA33_02520) - 483545..483640 (+) 96 WP_021495118.1 YjcZ family sporulation protein -
  OVA33_RS02525 (OVA33_02525) phrC 483791..483910 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  OVA33_RS02530 (OVA33_02530) rapC 483894..485042 (-) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  OVA33_RS02535 (OVA33_02535) - 485201..486628 (-) 1428 WP_088056326.1 HAMP domain-containing sensor histidine kinase -
  OVA33_RS02540 (OVA33_02540) - 486615..487298 (-) 684 WP_014416901.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=762494 OVA33_RS02525 WP_003156334.1 483791..483910(-) (phrC) [Bacillus sp. KICET-1]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=762494 OVA33_RS02525 WP_003156334.1 483791..483910(-) (phrC) [Bacillus sp. KICET-1]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718