Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   OPT60_RS07155 Genome accession   NZ_CP125359
Coordinates   1444938..1445600 (-) Length   220 a.a.
NCBI ID   WP_003057999.1    Uniprot ID   A0ABU0A4Z4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain UT_10236     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1439938..1450600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPT60_RS07140 (OPT60_07140) sodA 1440892..1441497 (-) 606 WP_014612432.1 superoxide dismutase SodA -
  OPT60_RS07145 (OPT60_07145) holA 1441587..1442633 (-) 1047 WP_015017201.1 DNA polymerase III subunit delta -
  OPT60_RS07150 (OPT60_07150) comEC/celB 1442714..1444957 (-) 2244 WP_084916495.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  OPT60_RS07155 (OPT60_07155) comEA 1444938..1445600 (-) 663 WP_003057999.1 helix-hairpin-helix domain-containing protein Machinery gene
  OPT60_RS07160 (OPT60_07160) - 1445997..1446737 (-) 741 WP_022554937.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  OPT60_RS07165 (OPT60_07165) - 1446855..1447631 (+) 777 WP_111679501.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  OPT60_RS07170 (OPT60_07170) - 1447621..1447899 (+) 279 WP_003061674.1 GIY-YIG nuclease family protein -
  OPT60_RS07175 (OPT60_07175) - 1447923..1449923 (-) 2001 WP_084916492.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24080.46 Da        Isoelectric Point: 5.8872

>NTDB_id=762412 OPT60_RS07155 WP_003057999.1 1444938..1445600(-) (comEA) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
MIDDLLTKGTNSLKKVYSLPRLIGVVLAIFLILTLSFVIWGKEQSQTKLPIVSTSSSIQQPASEEKKYSSEESNILVDLK
GAVQQEGVYKLRANSRVRDVIELAGGLTQEADRHAVNFAEKLVDEQVVYVAKQGEDISVLPNASSAGKANAEMSNSTKVN
INKANLEELQRISGIGVKRAQDILETRDSLGGFKTLDDLRQVSGIGEKTLEKLKHELSLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=762412 OPT60_RS07155 WP_003057999.1 1444938..1445600(-) (comEA) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
ATGATAGATGACTTGTTAACTAAAGGAACAAATAGCTTGAAAAAGGTTTATTCTCTGCCACGCTTGATTGGTGTTGTGCT
AGCCATTTTTCTGATACTAACCCTAAGTTTTGTTATCTGGGGAAAAGAGCAGAGCCAAACAAAACTTCCTATTGTATCAA
CTTCTTCTTCCATACAACAGCCAGCTAGTGAGGAAAAAAAGTATTCTTCAGAAGAGAGTAATATTTTAGTGGATTTAAAA
GGAGCCGTACAACAGGAGGGAGTTTATAAGCTCAGGGCTAATAGCCGTGTGCGCGATGTCATTGAATTAGCTGGGGGACT
TACTCAGGAAGCTGATAGACATGCTGTTAATTTTGCAGAAAAACTGGTGGATGAGCAGGTTGTGTATGTGGCTAAGCAGG
GTGAAGACATTTCTGTCTTGCCAAATGCCTCCTCAGCAGGTAAAGCTAACGCAGAAATGTCTAACTCAACAAAGGTGAAT
ATCAATAAAGCAAATTTAGAGGAGTTACAACGTATTTCGGGCATTGGTGTAAAAAGGGCTCAGGATATTCTTGAGACGAG
AGACAGTCTAGGTGGCTTTAAAACGTTAGATGATCTTAGACAGGTATCTGGAATTGGTGAAAAAACACTTGAGAAATTGA
AACATGAACTATCGTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-129)

Helix-hairpin-helix motif (HHH_3)

(155-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Bacillus subtilis subsp. subtilis str. 168

38.389

95.909

0.368