Detailed information NTG0762343

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OQH41_RS08335
• Genome accession: NZ_CP113442
• Coordinates: 1748147..1748848 (+)
• Length: 233 a.a.
• NCBI ID: WP_004747380.1
• Uniprot ID: A0A9E9PDK8
• Organism: Acinetobacter baumannii strain C9
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1743147..1753848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OQH41_RS08300 (OQH41_08300)	kdsB	1743670..1744431 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OQH41_RS08305 (OQH41_08305)	-	1744443..1745423 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
OQH41_RS08310 (OQH41_08310)	-	1745435..1745776 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
OQH41_RS08315 (OQH41_08315)	-	1745794..1746567 (+)	774	WP_000497302.1	TatD family hydrolase	-
OQH41_RS08320 (OQH41_08320)	-	1746605..1747213 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OQH41_RS08325 (OQH41_08325)	-	1747223..1747777 (+)	555	WP_005128793.1	type II secretion system protein	-
OQH41_RS08330 (OQH41_08330)	xcpV	1747767..1748147 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
OQH41_RS08335 (OQH41_08335)	xcpW	1748147..1748848 (+)	702	WP_004747380.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OQH41_RS08340 (OQH41_08340)	gspK	1748848..1749807 (+)	960	WP_005128789.1	type II secretion system minor pseudopilin GspK	-
OQH41_RS08345 (OQH41_08345)	-	1750037..1750633 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
OQH41_RS08350 (OQH41_08350)	ung	1750684..1751397 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
OQH41_RS08355 (OQH41_08355)	-	1751394..1752518 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OQH41_RS08360 (OQH41_08360)	tadA	1752525..1753028 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
OQH41_RS08365 (OQH41_08365)	-	1753098..1753541 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26629.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=762343 OQH41_RS08335 WP_004747380.1 1748147..1748848(+) (xcpW) [Acinetobacter baumannii strain C9]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=762343 OQH41_RS08335 WP_004747380.1 1748147..1748848(+) (xcpW) [Acinetobacter baumannii strain C9]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996