Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QL281_RS17945 Genome accession   NZ_CP125292
Coordinates   3365120..3365863 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain SRCM117797     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3360120..3370863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS17910 (QL281_17910) yhaI 3360449..3360790 (+) 342 WP_009966921.1 YhaI family protein -
  QL281_RS17915 (QL281_17915) scoC 3360787..3361398 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  QL281_RS17920 (QL281_17920) yhaH 3361576..3361932 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  QL281_RS17925 (QL281_17925) - 3362061..3362252 (+) 192 WP_024571664.1 hypothetical protein -
  QL281_RS17930 (QL281_17930) trpP 3362326..3362844 (-) 519 WP_041351924.1 tryptophan transporter TrpP -
  QL281_RS17935 (QL281_17935) serC 3362969..3364048 (-) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QL281_RS17940 (QL281_17940) hinT 3364195..3364632 (-) 438 WP_041052754.1 HIT family protein -
  QL281_RS17945 (QL281_17945) pptA 3365120..3365863 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  QL281_RS17950 (QL281_17950) ecsB 3365856..3367082 (+) 1227 WP_144458870.1 ABC transporter permease EcsB -
  QL281_RS17955 (QL281_17955) ecsC 3367102..3367812 (+) 711 WP_041052749.1 EcsC family protein -
  QL281_RS17960 (QL281_17960) sndC 3367830..3369020 (-) 1191 WP_041052746.1 N-acetyl amino acid acetylase SndC -
  QL281_RS17965 (QL281_17965) - 3369093..3370484 (-) 1392 WP_072557139.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=762304 QL281_RS17945 WP_003233230.1 3365120..3365863(+) (pptA) [Bacillus subtilis strain SRCM117797]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=762304 QL281_RS17945 WP_003233230.1 3365120..3365863(+) (pptA) [Bacillus subtilis strain SRCM117797]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTGAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCCTTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547