Detailed information NTG0762275

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: OQG81_RS01355
• Genome accession: NZ_CP113440
• Coordinates: 220765..223206 (+)
• Length: 813 a.a.
• NCBI ID: WP_014295432.1
• Uniprot ID: -
• Organism: Streptococcus macedonicus strain E37
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 215765..228206

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OQG81_RS01330 (OQG81_01330)	rpsB	217082..217849 (+)	768	WP_044563155.1	30S ribosomal protein S2	-
OQG81_RS01335 (OQG81_01335)	tsf	217960..218997 (+)	1038	WP_014295436.1	translation elongation factor Ts	-
OQG81_RS01340 (OQG81_01340)	-	219133..219597 (-)	465	WP_014295435.1	COG2426 family protein	-
OQG81_RS01345 (OQG81_01345)	-	219901..220032 (-)	132	WP_257235588.1	hypothetical protein	-
OQG81_RS01350 (OQG81_01350)	-	220307..220768 (+)	462	WP_039671296.1	CtsR family transcriptional regulator	-
OQG81_RS01355 (OQG81_01355)	clpC	220765..223206 (+)	2442	WP_014295432.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
OQG81_RS01360 (OQG81_01360)	dusB	223280..224257 (-)	978	WP_014295431.1	tRNA dihydrouridine synthase DusB	-
OQG81_RS01365 (OQG81_01365)	hslO	224250..225116 (-)	867	WP_014295430.1	Hsp33 family molecular chaperone HslO	-
OQG81_RS01370 (OQG81_01370)	-	225230..226504 (-)	1275	WP_014295429.1	toxic anion resistance protein	-
OQG81_RS01375 (OQG81_01375)	-	226534..227361 (-)	828	WP_014295428.1	hypothetical protein	-

Sequence

Protein

• Length: 813 a.a.
• Molecular weight: 90244.54 Da
• Isoelectric Point: 5.6473

>NTDB_id=762275 OQG81_RS01355 WP_014295432.1 220765..223206(+) (clpC) [Streptococcus macedonicus strain E37]
MSEYSIKMQEVFSVAQYQAARFESPYLESWHVLLAMVAIHDSVAGLTFAEYQTKIAYEEYEAAAVLAIGKSPLTDVDRVH
FVEQSKALSDVLAFAESICQVTGGNEIGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDAARLIDLRKSLARNAGFTKE
NIKAIHELRKPKKSTMGGAFSEMLKPQSTAEDLSDFTRDLTEMARQGKLEPVIGREKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVVISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPATLTPADKAILEGDFKLATKLLKESRKKPNRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLNLEKEFHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEIEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDEKTVGFGARDMAHDYEAMQKRIMEELKKTYRPEFINRIDEKVVFHN
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEIGYDPEMGARPLRRTLQDKVEDELSELILSGELASGNTLK
IGVSKGQLKFDIA

Nucleotide

• Length: 2442 bp

>NTDB_id=762275 OQG81_RS01355 WP_014295432.1 220765..223206(+) (clpC) [Streptococcus macedonicus strain E37]
ATGAGTGAGTATTCGATAAAAATGCAAGAGGTTTTCAGTGTTGCTCAATACCAAGCAGCGCGTTTTGAAAGCCCATATTT
AGAAAGTTGGCACGTCCTTTTAGCTATGGTTGCTATCCATGACTCAGTCGCAGGGCTAACATTTGCGGAATACCAAACTA
AAATTGCTTATGAAGAATATGAAGCGGCAGCTGTTTTAGCCATTGGGAAATCACCGTTAACGGATGTTGACAGAGTTCAC
TTTGTGGAACAATCTAAAGCTCTTAGTGATGTTTTAGCATTTGCTGAGTCTATTTGTCAGGTGACTGGTGGTAACGAAAT
CGGGACAGAACACGTGCTTTATGCGATGTTGTTAAACCTTGATTTATTTGCCACACGTTTGTTAGAGGTTGCTGGTTTTA
AAAACAAAGAAGACGGTGACGCTGCTCGTTTGATTGATTTGCGTAAGAGTTTGGCACGTAATGCTGGTTTTACAAAGGAA
AATATCAAAGCTATTCATGAACTTCGTAAGCCGAAAAAATCGACAATGGGCGGTGCTTTTTCTGAAATGCTGAAACCACA
GTCAACAGCGGAGGATTTGTCAGATTTCACGCGTGATTTGACAGAGATGGCACGTCAAGGAAAATTAGAACCTGTTATTG
GTCGTGAAAAAGAAATTTCTCGTATGGTGCAGGTGCTTAGCCGCAAAACGAAAAACAATCCAGTTTTAGTAGGGGAAGCT
GGTGTTGGTAAAACGGCTCTTGCTTACGGTTTGGCACAGCGAATTGTCAATGGTGCGATTCCGTATGAACTCCAAGACAT
GCGTGTTTTAGAGCTTGATATGATGAGCGTTGTGGCTGGTACGCGATTCCGTGGTGATTTTGAAGAACGCATGAACCAAA
TCATCTCAGATATTGAGGAAGACGGTCATATTATTCTATTCATTGACGAAGTGCATACGATTATGGGTTCAGGCTCTGGA
ATTGACAGCACTTTGGATGCGGCTAATATTTTAAAACCAGCACTTGCGCGTGGTACGCTTCATATGGTTGGTGCGACAAC
GCAAGAAGAATATCAAAAACATCTCGAAAAAGATGCGGCGCTTTCTCGCCGTTTTGCTAAGATTACCATTGAAGAACCAA
GTGTTGAAGATGCTTACCAAATCTTGCTTGGACTAAAGAAATCATATGAAGATTTTCATAATGTGGTGATTTCTGATGAA
GCTGTTTTAACGGCTGTCAAAGCTGCGCATCGCTATTTGACAAGTAAAAATCTTCCTGATTCAGCGATTGATTTGCTTGA
TGAAGCAAGTGCAACGGTTCAAGGTTTGGTGAAAAAAGAAGCGCCAGCTACTTTGACACCTGCTGATAAAGCTATTTTGG
AAGGTGATTTCAAATTGGCAACGAAATTGCTGAAAGAGTCACGCAAGAAGCCAAATCGTAAACCAACTGCTGTGACAGAA
GATGATATTATGGCAACGCTCAGTCGTTTGTCAGGTATTCCTGTTGAGAAAATGACACAGGCAGATAGTAAGAAATACTT
GAACCTCGAAAAAGAATTCCATAAGCGTGTAATTGGCCAAGATTCAGCTATTTCAGCGATTAGTCGTGCTATTCGTCGTA
ATCAAGCGGGCATTCGTACAGGCAAACGTCCGATTGGCTCGTTTATGTTCTTGGGTCCAACGGGTGTTGGTAAAACAGAG
TTGGCTAAGGCACTAGCAGAATTGCTATTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTACATGGAAAA
ATTTGCGGCGAGCCGTCTTAACGGAGCTCCTCCAGGGTATGTCGGTTATGAAGAAGGTGGCGAATTGACTGAAAAAGTTC
GCAACAAACCTTATTCTGTGCTTCTATTTGATGAAATTGAAAAAGCCCACCCAGATATTTTCAATGTGCTTCTCCAAGTG
TTGGATGACGGTGTGCTGACGGATAGTCGTGGTCGTAAAGTTGATTTTTCAAACACGATTATTATCATGACATCAAATCT
TGGGGCAACCGCTTTGCGTGATGAAAAGACAGTTGGTTTTGGTGCGCGTGATATGGCTCATGATTATGAGGCAATGCAAA
AACGCATCATGGAAGAACTCAAAAAAACTTACCGACCTGAATTCATCAACCGTATTGATGAAAAAGTTGTTTTCCACAAC
TTAACTCAAGAAAATATGCGTGATGTCGTGAAAATCATGGTTAAACCATTGATTGCGACACTAGCTGAAAAAGATATTAC
GCTAAAATTCCAACCATCAGCATTGAAATATTTAGCCGAAATTGGATACGACCCAGAAATGGGAGCTCGTCCGCTCCGCC
GTACTCTGCAAGATAAAGTTGAAGATGAATTATCAGAGCTTATTCTATCAGGCGAATTGGCAAGTGGAAATACCCTTAAA
ATCGGTGTTTCTAAAGGGCAACTCAAATTTGATATTGCTTAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (543-714)

• ATPase family associated with various cellular activities (AAA) (AAA) (235-366)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (721-800)

• AAA lid domain (AAA_lid_9) (374-452)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (95-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	76.724	99.877	0.766
clpC	Streptococcus thermophilus LMG 18311	73.374	100	0.736
clpC	Streptococcus thermophilus LMD-9	73.252	100	0.734
clpC	Streptococcus pneumoniae Rx1	67.442	100	0.678
clpC	Streptococcus pneumoniae D39	67.442	100	0.678
clpC	Streptococcus pneumoniae TIGR4	67.488	99.877	0.674
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	49.222	100	0.506
clpC	Bacillus subtilis subsp. subtilis str. 168	43.494	100	0.444