Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QL281_RS05935 Genome accession   NZ_CP125292
Coordinates   1073511..1074221 (-) Length   236 a.a.
NCBI ID   WP_015714539.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117797     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1068511..1079221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS05915 (QL281_05915) cysK 1068563..1069498 (+) 936 WP_003229237.1 cysteine synthase A -
  QL281_RS05920 (QL281_05920) pepV 1069532..1070923 (-) 1392 WP_041351164.1 dipeptidase PepV -
  QL281_RS05925 (QL281_05925) pbuO 1071020..1072318 (+) 1299 WP_014480583.1 hypoxanthine/guanine permease PbuO -
  QL281_RS05930 (QL281_05930) ythQ 1072357..1073514 (-) 1158 WP_017695480.1 ABC transporter permease -
  QL281_RS05935 (QL281_05935) pptA 1073511..1074221 (-) 711 WP_015714539.1 ABC transporter ATP-binding protein Regulator
  QL281_RS05940 (QL281_05940) ytzE 1074511..1074732 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  QL281_RS05945 (QL281_05945) rsuA 1074854..1075573 (-) 720 WP_017695479.1 pseudouridine synthase -
  QL281_RS05950 (QL281_05950) murJ 1075642..1077276 (-) 1635 WP_015251430.1 lipid II flippase MurJ -
  QL281_RS05955 (QL281_05955) ytfP 1077479..1078741 (+) 1263 WP_072557170.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26573.65 Da        Isoelectric Point: 5.5930

>NTDB_id=762239 QL281_RS05935 WP_015714539.1 1073511..1074221(-) (pptA) [Bacillus subtilis strain SRCM117797]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEEREFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRP

Nucleotide


Download         Length: 711 bp        

>NTDB_id=762239 QL281_RS05935 WP_015714539.1 1073511..1074221(-) (pptA) [Bacillus subtilis strain SRCM117797]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGAGAGAGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTTGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432