Detailed information NTG0762131

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OXA88_RS13125
• Genome accession: NZ_CP113436
• Coordinates: 2950461..2951528 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain PATHC021
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2945461..2956528

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OXA88_RS13100 (OXA88_13100)	-	2945752..2946468 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
OXA88_RS13105 (OXA88_13105)	-	2946750..2947616 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
OXA88_RS13110 (OXA88_13110)	rpoH	2947750..2948604 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
OXA88_RS13115 (OXA88_13115)	ftsX	2948901..2949830 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
OXA88_RS13120 (OXA88_13120)	ftsE	2949824..2950474 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
OXA88_RS13125 (OXA88_13125)	pilA	2950461..2951528 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
OXA88_RS13130 (OXA88_13130)	-	2951591..2952916 (+)	1326	WP_010948371.1	M16 family metallopeptidase	-
OXA88_RS13135 (OXA88_13135)	-	2952913..2954217 (+)	1305	WP_010948372.1	M16 family metallopeptidase	-
OXA88_RS13140 (OXA88_13140)	rsmD	2954214..2954759 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OXA88_RS13145 (OXA88_13145)	dotD	2954834..2955325 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
OXA88_RS13150 (OXA88_13150)	dotC	2955306..2956217 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=762131 OXA88_RS13125 WP_015443981.1 2950461..2951528(-) (pilA) [Legionella pneumophila strain PATHC021]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=762131 OXA88_RS13125 WP_015443981.1 2950461..2951528(-) (pilA) [Legionella pneumophila strain PATHC021]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501