Detailed information NTG0762089

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OXA87_RS13680
• Genome accession: NZ_CP113435
• Coordinates: 3089251..3090318 (-)
• Length: 355 a.a.
• NCBI ID: WP_013101927.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain PATHC025
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3084251..3095318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OXA87_RS13655 (OXA87_13655)	-	3084541..3085257 (-)	717	WP_011947578.1	dienelactone hydrolase family protein	-
OXA87_RS13660 (OXA87_13660)	-	3085538..3086404 (+)	867	WP_027223995.1	alpha/beta hydrolase	-
OXA87_RS13665 (OXA87_13665)	rpoH	3086539..3087393 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
OXA87_RS13670 (OXA87_13670)	ftsX	3087691..3088620 (-)	930	WP_013101925.1	permease-like cell division protein FtsX	-
OXA87_RS13675 (OXA87_13675)	ftsE	3088614..3089264 (-)	651	WP_013101926.1	cell division ATP-binding protein FtsE	-
OXA87_RS13680 (OXA87_13680)	pilA	3089251..3090318 (-)	1068	WP_013101927.1	signal recognition particle-docking protein FtsY	Machinery gene
OXA87_RS13685 (OXA87_13685)	-	3090381..3091706 (+)	1326	WP_013101928.1	M16 family metallopeptidase	-
OXA87_RS13690 (OXA87_13690)	-	3091703..3093007 (+)	1305	WP_013101929.1	M16 family metallopeptidase	-
OXA87_RS13695 (OXA87_13695)	rsmD	3093004..3093549 (+)	546	WP_013101930.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OXA87_RS13700 (OXA87_13700)	dotD	3093624..3094115 (+)	492	WP_014842716.1	type IVB secretion system lipoprotein DotD	-
OXA87_RS13705 (OXA87_13705)	dotC	3094096..3095007 (+)	912	WP_011216545.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39059.65 Da
• Isoelectric Point: 5.9087

>NTDB_id=762089 OXA87_RS13680 WP_013101927.1 3089251..3090318(-) (pilA) [Legionella pneumophila strain PATHC025]
MIKWFKRNQNSEPNLDTEEQQDHAESSMESRLEEPKELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDILIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=762089 OXA87_RS13680 WP_013101927.1 3089251..3090318(-) (pilA) [Legionella pneumophila strain PATHC025]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAACAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAGCCCAAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATTAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCAGACTCTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGTTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCTGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCTGCTGCGGTGGAGCAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATATTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAATGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-130)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.811	84.789	0.482