Detailed information NTG0762007

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OXA92_RS13530
• Genome accession: NZ_CP113433
• Coordinates: 3018481..3019548 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain PATHC034
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3013481..3024548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OXA92_RS13505 (OXA92_13505)	-	3013772..3014488 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
OXA92_RS13510 (OXA92_13510)	-	3014770..3015636 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
OXA92_RS13515 (OXA92_13515)	rpoH	3015770..3016624 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
OXA92_RS13520 (OXA92_13520)	ftsX	3016921..3017850 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
OXA92_RS13525 (OXA92_13525)	ftsE	3017844..3018494 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
OXA92_RS13530 (OXA92_13530)	pilA	3018481..3019548 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
OXA92_RS13535 (OXA92_13535)	-	3019611..3020936 (+)	1326	WP_010948371.1	M16 family metallopeptidase	-
OXA92_RS13540 (OXA92_13540)	-	3020933..3022237 (+)	1305	WP_010948372.1	M16 family metallopeptidase	-
OXA92_RS13545 (OXA92_13545)	rsmD	3022234..3022779 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OXA92_RS13550 (OXA92_13550)	dotD	3022854..3023345 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
OXA92_RS13555 (OXA92_13555)	dotC	3023326..3024237 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=762007 OXA92_RS13530 WP_015443981.1 3018481..3019548(-) (pilA) [Legionella pneumophila strain PATHC034]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=762007 OXA92_RS13530 WP_015443981.1 3018481..3019548(-) (pilA) [Legionella pneumophila strain PATHC034]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501