Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   OXA92_RS07090 Genome accession   NZ_CP113433
Coordinates   1563407..1563748 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila strain PATHC034     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1558407..1568748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OXA92_RS07060 (OXA92_07060) fabG 1558408..1559151 (+) 744 WP_411911428.1 3-oxoacyl-ACP reductase FabG -
  OXA92_RS07065 (OXA92_07065) acpP 1559236..1559484 (+) 249 WP_003631752.1 acyl carrier protein -
  OXA92_RS07070 (OXA92_07070) fabF 1559504..1560742 (+) 1239 WP_010947126.1 beta-ketoacyl-ACP synthase II -
  OXA92_RS07075 (OXA92_07075) mltG 1560743..1561741 (+) 999 WP_010947127.1 endolytic transglycosylase MltG -
  OXA92_RS07080 (OXA92_07080) tmk 1561741..1562379 (+) 639 WP_268101002.1 dTMP kinase -
  OXA92_RS07085 (OXA92_07085) - 1562376..1563281 (+) 906 WP_011213692.1 DNA polymerase III subunit delta' -
  OXA92_RS07090 (OXA92_07090) pilZ 1563407..1563748 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  OXA92_RS07095 (OXA92_07095) - 1563808..1564596 (+) 789 WP_011213694.1 TatD family hydrolase -
  OXA92_RS07100 (OXA92_07100) - 1564708..1565808 (+) 1101 WP_011213695.1 anhydro-N-acetylmuramic acid kinase -
  OXA92_RS07105 (OXA92_07105) - 1565864..1567156 (+) 1293 WP_011213696.1 MFS transporter -
  OXA92_RS07110 (OXA92_07110) - 1567229..1567372 (+) 144 WP_169042656.1 hypothetical protein -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=761984 OXA92_RS07090 WP_025519545.1 1563407..1563748(+) (pilZ) [Legionella pneumophila strain PATHC034]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=761984 OXA92_RS07090 WP_025519545.1 1563407..1563748(+) (pilZ) [Legionella pneumophila strain PATHC034]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
GGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTTAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGCCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATCTAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1

  pilZ Legionella pneumophila strain ERS1305867

100

100

1