Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   QIY60_RS10820 Genome accession   NZ_CP124863
Coordinates   2423651..2424775 (+) Length   374 a.a.
NCBI ID   WP_283142212.1    Uniprot ID   -
Organism   Streptomyces sp. BPTC-684     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2418651..2429775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QIY60_RS10805 (QIY60_10805) - 2419419..2420231 (+) 813 WP_283142209.1 hypothetical protein -
  QIY60_RS10810 (QIY60_10810) - 2420270..2422006 (-) 1737 WP_283142210.1 sigma-70 family RNA polymerase sigma factor -
  QIY60_RS10815 (QIY60_10815) radA/sms 2422205..2423614 (+) 1410 WP_283142211.1 DNA repair protein RadA Machinery gene
  QIY60_RS10820 (QIY60_10820) disA 2423651..2424775 (+) 1125 WP_283142212.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  QIY60_RS10825 (QIY60_10825) - 2424959..2425789 (-) 831 WP_283142213.1 hypothetical protein -
  QIY60_RS10830 (QIY60_10830) - 2425902..2426516 (+) 615 WP_283142214.1 phosphatase PAP2 family protein -
  QIY60_RS10835 (QIY60_10835) - 2426578..2427480 (+) 903 WP_283145892.1 A/G-specific adenine glycosylase -
  QIY60_RS10840 (QIY60_10840) - 2427725..2428333 (+) 609 WP_283142215.1 SigE family RNA polymerase sigma factor -
  QIY60_RS10845 (QIY60_10845) - 2428375..2428977 (+) 603 WP_283142216.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40336.16 Da        Isoelectric Point: 5.0230

>NTDB_id=761663 QIY60_RS10820 WP_283142212.1 2423651..2424775(+) (disA) [Streptomyces sp. BPTC-684]
MAANDRAAGTGKSGTGSGNEALMRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKTVDSMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDAGIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVPEALTELNELTHAELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=761663 QIY60_RS10820 WP_283142212.1 2423651..2424775(+) (disA) [Streptomyces sp. BPTC-684]
GTGGCAGCCAACGACCGGGCAGCGGGAACCGGCAAGTCCGGCACAGGCTCCGGCAACGAAGCGCTGATGCGTGCCGCGCT
GAGCGCCGTCGCGCCCGGCACCGCACTCCGCGACGGCCTGGAGCGCATCCTCCGGGGCAACACGGGCGGCCTGATCGTCC
TCGGCCTCGACAAGACGGTCGACTCCATGTGCACGGGCGGGTTCGTCCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTGGTCCTGGACAAGGACATCACCAAGATCCACCGGGCCGGGGTGCAGCTGGTCCC
GGACGCGGGCATCCCCACGGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCCCAGTCCATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTCTCGCGCGCGAACCAGGCGCTGGCGACGCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTGGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCACGGCGGTGGCCCAGCGTCTGGAGATGGTGAGACGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGTTGGGCACGGACGGGCGGCTGCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTCGAGCCCGAGCGGGAGCTGGTGGTGCGGGACTACGTGCCCGAGCCCACGGCGAAGCGCTCCCGCACGGTGCCGGA
GGCGCTGACGGAGCTGAACGAGCTCACCCACGCGGAGCTGCTTGAACTGCCCATAGTGGCGCGGGCGTTGGGCTACAGCG
GCTCCCCCGAGACGCTGGACTCCGCGGTCTCCCCCCGCGGCTACCGCCTCCTGGCCAAGGTCCCCCGCCTCCCCGGCGCG
ATCATCGAACGCCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCCGCGTCGGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGGCTGTCGCGCTTGGCGGAGTCGTCGATCCTGGAGCGATACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436