Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QJ053_RS03325 Genome accession   NZ_CP124853
Coordinates   679748..680422 (+) Length   224 a.a.
NCBI ID   WP_001166503.1    Uniprot ID   -
Organism   Staphylococcus aureus strain ED83     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 674748..685422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJ053_RS03300 (QJ053_03300) - 674963..676030 (+) 1068 WP_410530516.1 hypothetical protein -
  QJ053_RS03305 (QJ053_03305) - 676181..677224 (+) 1044 WP_410530517.1 alpha/beta hydrolase -
  QJ053_RS03310 (QJ053_03310) - 677553..677981 (+) 429 WP_410530518.1 hypothetical protein -
  QJ053_RS03315 (QJ053_03315) - 678190..678696 (-) 507 WP_410530519.1 GNAT family N-acetyltransferase -
  QJ053_RS03320 (QJ053_03320) graX 678809..679732 (+) 924 WP_000802949.1 auxiliary protein GraX/ApsX -
  QJ053_RS03325 (QJ053_03325) braR 679748..680422 (+) 675 WP_001166503.1 response regulator transcription factor GraR/ApsR Regulator
  QJ053_RS03330 (QJ053_03330) graS 680415..681455 (+) 1041 WP_001061252.1 histidine kinase GraS/ApsS -
  QJ053_RS03335 (QJ053_03335) vraF 681599..682360 (+) 762 WP_410530520.1 ABC transporter ATP-binding protein VraF -
  QJ053_RS03340 (QJ053_03340) vraG 682350..684239 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26048.89 Da        Isoelectric Point: 4.3968

>NTDB_id=761466 QJ053_RS03325 WP_001166503.1 679748..680422(+) (braR) [Staphylococcus aureus strain ED83]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=761466 QJ053_RS03325 WP_001166503.1 679748..680422(+) (braR) [Staphylococcus aureus strain ED83]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGGGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406