Detailed information NTG0761357

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OUY36_RS20620
• Genome accession: NZ_CP113258
• Coordinates: 4383533..4384819 (-)
• Length: 428 a.a.
• NCBI ID: WP_267935806.1
• Uniprot ID: -
• Organism: Stutzerimonas sp. R40042
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4378533..4389819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OUY36_RS20605 (OUY36_20605)	rpoH	4380883..4381737 (-)	855	WP_003297176.1	RNA polymerase sigma factor RpoH	-
OUY36_RS20610 (OUY36_20610)	ftsX	4381849..4382868 (-)	1020	WP_102838920.1	permease-like cell division protein FtsX	-
OUY36_RS20615 (OUY36_20615)	ftsE	4382865..4383536 (-)	672	WP_045665759.1	cell division ATP-binding protein FtsE	-
OUY36_RS20620 (OUY36_20620)	pilA	4383533..4384819 (-)	1287	WP_267935806.1	signal recognition particle-docking protein FtsY	Machinery gene
OUY36_RS20625 (OUY36_20625)	-	4385048..4386400 (+)	1353	WP_156244978.1	pitrilysin family protein	-
OUY36_RS20630 (OUY36_20630)	-	4386393..4387925 (+)	1533	WP_267935807.1	pitrilysin family protein	-
OUY36_RS20635 (OUY36_20635)	rsmD	4387925..4388527 (+)	603	WP_267935808.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OUY36_RS20640 (OUY36_20640)	-	4388539..4388943 (-)	405	WP_013984344.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 45759.13 Da
• Isoelectric Point: 4.5606

>NTDB_id=761357 OUY36_RS20620 WP_267935806.1 4383533..4384819(-) (pilA) [Stutzerimonas sp. R40042]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPAPAEQPAAEQPDSESVEQTGAPVESPVATPQEEQPARMVEADMQPAEDIE
PVLLHPEPEPEPEPEPEPEPEPEPLLAPVVATAPEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELE
TRLLTADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLTIDAGKRPYVILVVGVNGVGKTTTIG
KLAKKLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVVAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKD
NLMEELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTKQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYI
GVGEGIDDLRTFEADAFVKALFSQREDA

Nucleotide

• Length: 1287 bp

>NTDB_id=761357 OUY36_RS20620 WP_267935806.1 4383533..4384819(-) (pilA) [Stutzerimonas sp. R40042]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGTGAAAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCGCAGCCCGCGCCGGCAGAGCAGCCCGCCGCCGAACAGCCGGACAGCGAATCGGTCGAGCAGACCGGGGCGCCTGTCG
AATCGCCTGTCGCGACACCTCAGGAAGAGCAACCGGCGCGCATGGTCGAGGCCGATATGCAGCCGGCTGAGGACATAGAG
CCGGTGCTGCTGCACCCTGAGCCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCGGAGCCGTTACTTGC
CCCGGTCGTAGCGACCGCGCCGGAGGCCCCAGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGGCTGTCGAAAACCA
GCGCCAGCATTGGCGAAGGTATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAA
ACCCGCCTGCTGACCGCCGACGTCGGCGTCGAGGCGACCACTGCGATCATGCAGAATCTCACCCGGCGCGTCTCGCGCAA
GGAGTTGGCCGACAGCGGCGCGCTCTACACCGCACTGCAGGAAGAACTCGTTGGCCTGCTCAAGCCGGTCGAGCAGCCGC
TGACGATCGATGCTGGCAAGCGCCCGTATGTCATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGC
AAGCTGGCCAAGAAGCTGCAGCTCGACGGCAAGAAGGTCATGCTCGCCGCCGGCGACACATTCCGCGCTGCGGCGGTGGA
GCAGCTGCAGGTCTGGGGCGAGCGCAACGGCATTCCGGTGGTCGCCCAGCACACTGGTGCCGATTCCGCCTCGGTGATCT
TCGATGCGGTGCAGGCCGCCAAGGCGCGCGGCATCGACGTGCTGATCGCCGACACCGCGGGCCGACTGCATACCAAGGAC
AACCTGATGGAAGAGCTGAAAAAAGTCCGTCGGGTGATGGGCAAGCTCGACGAGTCGGCTCCCCACGAAGTCCTGCTGGT
ACTCGACGCCGGCACTGGCCAGAACGCCATCAACCAGACCAAGCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTGGCAC
TGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGATCTTCGCGCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATC
GGCGTGGGTGAAGGCATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCTCCCAGCGGGAAGA
CGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (223-422)

• SRP54-type protein, helical bundle domain (SRP54_N) (138-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.057	99.065	0.486