Detailed information NTG0761326

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OSV15_RS22285
• Genome accession: NZ_CP113257
• Coordinates: 4637995..4639281 (-)
• Length: 428 a.a.
• NCBI ID: WP_267931443.1
• Uniprot ID: A0AA47HYK1
• Organism: Stutzerimonas frequens strain TF18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4632995..4644281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSV15_RS22270 (OSV15_22270)	rpoH	4635345..4636199 (-)	855	WP_003297176.1	RNA polymerase sigma factor RpoH	-
OSV15_RS22275 (OSV15_22275)	ftsX	4636311..4637330 (-)	1020	WP_110778808.1	permease-like cell division protein FtsX	-
OSV15_RS22280 (OSV15_22280)	ftsE	4637327..4637998 (-)	672	WP_045665759.1	cell division ATP-binding protein FtsE	-
OSV15_RS22285 (OSV15_22285)	pilA	4637995..4639281 (-)	1287	WP_267931443.1	signal recognition particle-docking protein FtsY	Machinery gene
OSV15_RS22290 (OSV15_22290)	-	4639510..4640862 (+)	1353	WP_267931444.1	M16 family metallopeptidase	-
OSV15_RS22295 (OSV15_22295)	-	4640855..4642387 (+)	1533	WP_267931445.1	M16 family metallopeptidase	-
OSV15_RS22300 (OSV15_22300)	rsmD	4642387..4642989 (+)	603	WP_045632982.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OSV15_RS22305 (OSV15_22305)	-	4643001..4643405 (-)	405	WP_013984344.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 45699.02 Da
• Isoelectric Point: 4.5894

>NTDB_id=761326 OSV15_RS22285 WP_267931443.1 4637995..4639281(-) (pilA) [Stutzerimonas frequens strain TF18]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPAPAEQPAAEQPDSESVEQTGAPVESPVATPQEEQPARAVEADMQPAEVIE
PVLLHPDPEPEPEPEPEPEPEPEPVPAPVVTTAPEAPTKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELE
TRLLTADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIG
KLAKKLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVVAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKD
NLMEELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTKQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYI
GVGESIDDLRTFEADAFVKALFSQREDA

Nucleotide

• Length: 1287 bp

>NTDB_id=761326 OSV15_RS22285 WP_267931443.1 4637995..4639281(-) (pilA) [Stutzerimonas frequens strain TF18]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGTGAAAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCGCAGCCCGCGCCGGCAGAGCAGCCCGCCGCCGAACAGCCGGACAGCGAATCGGTCGAGCAGACCGGGGCGCCTGTCG
AATCGCCTGTCGCGACACCTCAGGAAGAGCAACCGGCGCGTGCGGTCGAGGCCGATATGCAGCCGGCTGAGGTCATAGAG
CCGGTGCTGCTGCACCCTGACCCTGAACCTGAACCTGAACCTGAACCTGAACCTGAACCTGAACCGGAGCCGGTACCTGC
CCCGGTCGTGACGACCGCGCCGGAGGCCCCAACCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGACTGTCGAAAACCA
GCGCCAGCATTGGCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAGCTGGAA
ACCCGCCTGCTCACCGCCGACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAATCTCACCCGGCGCGTCTCGCGCAA
GGAGCTGGCCGACAGCGGCGCGCTCTACACCGCGCTGCAGGAAGAACTCGTTGGCCTGCTCAAGCCGGTCGAGCAGCCGC
TGGCGATCGATGCTGGCAAGCGCCCGTATGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGTAAGACCACCACCATCGGC
AAGCTGGCCAAGAAGCTGCAGCTCGACGGCAAGAAGGTCATGCTCGCCGCCGGCGACACATTCCGCGCCGCGGCGGTGGA
GCAGCTGCAGGTCTGGGGCGAGCGCAACGGCATTCCGGTGGTCGCCCAGCACACCGGTGCCGATTCCGCCTCGGTGATCT
TCGATGCGGTGCAGGCCGCCAAGGCGCGCGGCATCGACGTGCTGATCGCCGACACCGCGGGCCGTCTGCATACCAAGGAC
AACCTGATGGAAGAGCTGAAGAAAGTCCGTCGGGTGATGGGCAAGCTCGACGAGTCGGCTCCCCACGAAGTCCTGCTGGT
ACTCGACGCCGGCACTGGCCAGAACGCCATCAACCAGACCAAGCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTGGCAC
TGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGATCTTCGCGCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATC
GGCGTGGGTGAAAGCATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCTCCCAGCGGGAAGA
CGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (223-422)

• SRP54-type protein, helical bundle domain (SRP54_N) (138-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.821	99.065	0.484