Detailed information NTG0761293

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ORP33_RS19155
• Genome accession: NZ_CP113256
• Coordinates: 3701958..3703103 (+)
• Length: 381 a.a.
• NCBI ID: WP_213414789.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain K1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3696958..3708103

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ORP33_RS19135 (ORP33_18720)	albF	3696974..3698254 (+)	1281	WP_029318696.1	M16 family metallopeptidase	-
ORP33_RS19140 (ORP33_18725)	albG	3698251..3698952 (+)	702	WP_225722130.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ORP33_RS19145 (ORP33_18730)	ywhL	3698958..3700334 (-)	1377	WP_041351296.1	YncE family protein	-
ORP33_RS19150 (ORP33_18735)	ywhK	3700373..3701728 (-)	1356	WP_225722131.1	YncE family protein	-
ORP33_RS21035	-	3701725..3701955 (-)	231	WP_033883387.1	hypothetical protein	-
ORP33_RS19155 (ORP33_18740)	rapF	3701958..3703103 (+)	1146	WP_213414789.1	tetratricopeptide repeat protein	Regulator
ORP33_RS19160 (ORP33_18745)	-	3703087..3703206 (+)	120	WP_014665774.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ORP33_RS19165	-	3703321..3703765 (+)	445	Protein_3719	YbaK/EbsC family protein	-
ORP33_RS19170 (ORP33_18755)	speB	3703802..3704674 (-)	873	WP_003227545.1	agmatinase	-
ORP33_RS19175 (ORP33_18760)	speE	3704735..3705565 (-)	831	WP_003227543.1	spermidine synthase	-
ORP33_RS19180 (ORP33_18765)	pbpG	3705768..3707843 (+)	2076	WP_017696252.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45593.28 Da
• Isoelectric Point: 5.1616

>NTDB_id=761293 ORP33_RS19155 WP_213414789.1 3701958..3703103(+) (rapF) [Bacillus subtilis strain K1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYVLAIQFFKKAESKLVFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYSEQTTYDIRMIQCQSLFGANFLDLKQYEKAIAHFQKAFTLAKTEQKPQLMGRTLYNIALCKQNQNSFES
AIEYVKKSIQVFEGSKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGKEYSAAAGDTVYLTEFEFLESLYLSGPDEERI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASHYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=761293 ORP33_RS19155 WP_213414789.1 3701958..3703103(+) (rapF) [Bacillus subtilis strain K1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGAATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCGCCGTGAATATGTATTAGCCATTCAATTCTTTAAAAAAGCTGAGAGCAAGCTGGTTTTTG
TGAAAGATAAAATCGATAAAGCTGAATTCTTTTTCAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTCTCC
ATGGACTATGCACGTCAAGCATTCGAAATATACAGTGAACAGACTACATATGATATCAGAATGATTCAATGCCAGTCCTT
ATTCGGAGCCAACTTTTTGGATTTAAAACAATACGAAAAAGCAATTGCCCATTTTCAAAAAGCCTTTACACTTGCAAAAA
CAGAGCAGAAGCCCCAATTAATGGGAAGAACACTTTATAACATAGCACTCTGCAAGCAAAACCAAAACAGTTTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCAAGTATTTGAAGGATCTAAAATGCTCCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCCTGTGAATATCATAAAAAAGGAAAAGAGTATTCTGCAG
CTGCGGGAGATACCGTGTATCTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCGGATGAGGAACGGATA
GAAAAATGTTTTGTTTTTCTTGAAAGTAAAATGATGTATGCAGATATTGAGGACTTCGCACTTGATGTTGCTAAATATTA
TCATCAACAGGAAAATTACAAAAAAGCATCTCATTACTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (189-253)

• Tetratricopeptide repeat (TPR_8) (263-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	79.79	100	0.798
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572