Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ORP33_RS07675 Genome accession   NZ_CP113256
Coordinates   1461795..1462370 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain K1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1456795..1467370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORP33_RS07645 (ORP33_07525) dapD 1456982..1457692 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ORP33_RS07650 (ORP33_07530) dapI 1457762..1458886 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  ORP33_RS07655 (ORP33_07535) ykuS 1458948..1459193 (+) 246 WP_003232382.1 YkuS family protein -
  ORP33_RS07660 (ORP33_07540) mscT 1459230..1460033 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ORP33_RS07665 (ORP33_07545) ahpA 1460270..1460812 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ORP33_RS07670 (ORP33_07550) ykuV 1460883..1461329 (+) 447 WP_038428900.1 thiol-disulfide oxidoreductase YkuV -
  ORP33_RS07675 (ORP33_07555) rok 1461795..1462370 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ORP33_RS07680 (ORP33_07560) cse15 1462411..1463376 (-) 966 WP_213414451.1 spore protein Cse15 -
  ORP33_RS07685 (ORP33_07565) mobA 1463513..1464112 (+) 600 WP_213414452.1 molybdenum cofactor guanylyltransferase -
  ORP33_RS07690 (ORP33_07570) moeB 1464163..1465182 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  ORP33_RS07695 (ORP33_07575) glp 1465200..1466492 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  ORP33_RS07700 (ORP33_07580) mobB 1466453..1466974 (+) 522 WP_043857419.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=761250 ORP33_RS07675 WP_003232378.1 1461795..1462370(+) (rok) [Bacillus subtilis strain K1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=761250 ORP33_RS07675 WP_003232378.1 1461795..1462370(+) (rok) [Bacillus subtilis strain K1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1