Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ORP33_RS01965 Genome accession   NZ_CP113256
Coordinates   366565..366963 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain K1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 361565..371963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORP33_RS01930 - 362318..362514 (+) 197 Protein_336 hypothetical protein -
  ORP33_RS01935 (ORP33_01910) yckC 362533..362982 (+) 450 WP_087614278.1 RDD family protein -
  ORP33_RS01940 (ORP33_01915) yckD 363064..363396 (+) 333 WP_003246247.1 YckD family protein -
  ORP33_RS01945 (ORP33_01920) - 363524..363946 (+) 423 WP_198297576.1 MarR family winged helix-turn-helix transcriptional regulator -
  ORP33_RS01950 (ORP33_01925) - 363934..364275 (+) 342 WP_087614281.1 DUF3147 family protein -
  ORP33_RS01955 (ORP33_01930) - 364294..365022 (+) 729 WP_087614282.1 AAA family ATPase -
  ORP33_RS01960 (ORP33_01935) bglC 365095..366528 (+) 1434 WP_087614284.1 6-phospho-beta-glucosidase -
  ORP33_RS01965 (ORP33_01940) nin/comJ 366565..366963 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  ORP33_RS01970 (ORP33_01945) nucA/comI 366990..367439 (-) 450 WP_129092925.1 DNA-entry nuclease Machinery gene
  ORP33_RS01975 (ORP33_01950) tlpC 367607..369328 (-) 1722 WP_087614285.1 methyl-accepting chemotaxis protein TlpC -
  ORP33_RS01980 (ORP33_01955) hxlB 369439..369996 (-) 558 WP_086343442.1 6-phospho-3-hexuloisomerase -
  ORP33_RS01985 (ORP33_01960) hxlA 370002..370634 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  ORP33_RS01990 (ORP33_01965) hxlR 370866..371228 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=761226 ORP33_RS01965 WP_015715226.1 366565..366963(-) (nin/comJ) [Bacillus subtilis strain K1]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=761226 ORP33_RS01965 WP_015715226.1 366565..366963(-) (nin/comJ) [Bacillus subtilis strain K1]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985