Detailed information NTG0761095

Bioinformatically predicted

Overview

• Name: tfoS
• Type: Regulator
• Locus tag: OOK74_RS03905
• Genome accession: NZ_CP113241
• Coordinates: 811896..815246 (+)
• Length: 1116 a.a.
• NCBI ID: WP_274722233.1
• Uniprot ID: -
• Organism: Vibrio sp. gvc
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 806896..820246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OOK74_RS03880	sucC	807010..808176 (+)	1167	WP_278183143.1	ADP-forming succinate--CoA ligase subunit beta	-
OOK74_RS03885	sucD	808176..809048 (+)	873	WP_274722230.1	succinate--CoA ligase subunit alpha	-
OOK74_RS03890	znuB	809170..809952 (-)	783	WP_166013349.1	zinc ABC transporter permease subunit ZnuB	-
OOK74_RS03895	znuC	809945..810733 (-)	789	WP_274722231.1	zinc ABC transporter ATP-binding protein ZnuC	-
OOK74_RS03900	znuA	810816..811700 (+)	885	WP_274722232.1	zinc ABC transporter substrate-binding protein ZnuA	-
OOK74_RS03905	tfoS	811896..815246 (+)	3351	WP_274722233.1	AraC family transcriptional regulator	Regulator
OOK74_RS03910	-	815764..815994 (+)	231	WP_274722234.1	FeoA family protein	-
OOK74_RS03915	feoB	815991..818270 (+)	2280	WP_274722235.1	Fe(2+) transporter permease subunit FeoB	-
OOK74_RS03920	-	818267..818497 (+)	231	WP_274722236.1	FeoC-like transcriptional regulator	-
OOK74_RS03925	-	818611..819042 (-)	432	WP_274722237.1	HIT domain-containing protein	-

Sequence

Protein

• Length: 1116 a.a.
• Molecular weight: 126279.52 Da
• Isoelectric Point: 6.6117

>NTDB_id=761095 OOK74_RS03905 WP_274722233.1 811896..815246(+) (tfoS) [Vibrio sp. gvc]
MFRTFLYSCWLSLIIPSLGVANNNPMSVFYPLSMQEKGTVIVAKNLYLGDDGGIWIHDVHGKVMFFDGQNILPARGSVLP
ETSKHIIYAKRALWTFEQHQLFRTYPGGEKEPILTLPPGSQINQIGVSNGMIWLNDSANFYSYDIDNARLDTFSLHQLYS
LNSASQVVINDAQFFASKWALATNVGVYLSMPQGFSHITDSGKSAIQKLYFSEQRRELLVGSAHGALIIDIEHSRLLSKP
IGAAEVLSIAETDTEYWIGTENGLYLYRLDSGKVTPPETYRNDDYALLGKKIYSMVNDLQGGMWIATDKGMFYYSLLAQQ
LTRYPAQSLSSDGSRVQISKIKSFNTQGDYLAITQQGLYRFNFTGEFRKNLIYPGQVNDFVIAGDDVWIATEQGLVSYNL
AQRQINAPSLPVSLLHNSVKRLTVDGDGRLWGASHEQLWSYLPSEQSETNYGMEWMVKGLSPAKITVLAAVEQGIVIGTE
HGAYTLFDKQIRFDFSSHRYGEIVQVVEDNTGHIWLVGAYGVFQWQNHQPPAIAVELVEENIQPRCIAQSAQGMWLISSQ
GISLYSHQAQLSKHFAAPYGLISNEFILDACAVGEVLDSSFLIMGSQFGVVQANTQALAVSNLPNIQIMFSQVSVNHQPK
LLGYQPDGLLQIAYDDAISFQFGALSSLRNPSLEYKLNDEREWQRFDWAQLNFDRLLPGEYRLKVRSANPTHQDQTPAIF
DFEVLPPWYLSPAAIIGYVMLLGGGLSLMLSWRTRVIVEANRQLKNQVELKTSQLHHQTKIVQSSNQQLRKLLQVHHNLF
GKVFESIDPALRHLSSYAKVRGWNEFELPFNKVKQELTQLHFMHRGETPESQRHDLNLLMESALKSWQEEYNKAEIQLVY
RGEVCLIEIRQFNLDILFNVVFTDAIRRLAKQQQLSIQLEQRDSQGVLIFSDHGSVIDNFSAIPVSFNGACTYSVQELVQ
HSGGELRILRFDKRNVLELAWPLAALPVTQPFKAQALSIVDHIVLDDGEKKWLRKVNQLIEHNYSDSDFTTSRAAQLLFV
SERSLQRRFKAATGKTFKESLNQMRLEKACQSLLCGARIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQEGR

Nucleotide

• Length: 3351 bp

>NTDB_id=761095 OOK74_RS03905 WP_274722233.1 811896..815246(+) (tfoS) [Vibrio sp. gvc]
GTGTTTCGCACATTTTTATACAGCTGCTGGCTGAGTCTTATCATTCCGTCACTAGGAGTGGCCAACAATAACCCGATGTC
GGTTTTCTACCCTTTATCTATGCAGGAAAAAGGGACGGTGATAGTGGCGAAAAATCTGTATCTCGGCGACGACGGCGGAA
TATGGATCCATGATGTCCATGGCAAGGTGATGTTTTTTGATGGACAGAATATTTTGCCAGCGCGTGGTTCGGTATTACCC
GAAACCTCAAAGCATATTATTTATGCCAAGCGCGCGTTGTGGACCTTTGAGCAACATCAACTGTTTCGCACCTATCCGGG
AGGAGAGAAAGAGCCCATCTTAACCCTGCCCCCAGGTTCTCAAATTAATCAGATCGGCGTGTCAAATGGCATGATTTGGT
TGAACGATAGCGCGAATTTTTATAGTTATGATATTGATAATGCAAGGCTTGATACTTTTTCTTTGCACCAGCTTTATTCG
TTGAACAGCGCCAGCCAAGTAGTAATTAATGATGCGCAGTTTTTCGCCTCAAAATGGGCTTTAGCGACCAATGTCGGTGT
TTATTTGTCGATGCCACAAGGCTTTAGCCATATCACGGACTCTGGTAAGTCGGCGATCCAAAAGCTCTATTTTTCTGAAC
AGCGGCGCGAGCTATTGGTTGGCTCTGCACATGGCGCATTGATCATCGATATTGAGCACTCGCGCTTATTGTCCAAACCA
ATCGGTGCTGCGGAAGTGTTGTCAATCGCTGAAACCGACACTGAGTATTGGATTGGTACTGAAAATGGTCTGTATCTTTA
CAGACTAGATAGCGGAAAAGTCACTCCACCTGAAACATATCGCAACGATGATTATGCACTATTGGGTAAGAAAATTTACT
CAATGGTTAATGATTTACAAGGTGGTATGTGGATCGCGACTGATAAAGGTATGTTTTATTATTCATTATTGGCTCAGCAG
CTGACGCGATATCCTGCGCAAAGCTTATCCAGTGATGGTAGTCGGGTCCAAATCAGTAAAATTAAGTCGTTCAACACGCA
GGGAGATTATTTAGCGATAACCCAACAAGGCCTATATCGATTTAACTTTACTGGCGAATTTCGTAAAAACTTGATTTATC
CCGGTCAAGTCAATGATTTCGTTATTGCTGGAGATGACGTCTGGATTGCTACTGAGCAAGGGCTGGTGAGCTACAATCTT
GCACAGCGCCAGATCAACGCTCCGTCATTGCCGGTGTCATTGCTGCACAATTCGGTTAAACGGCTCACCGTCGATGGTGA
TGGTCGGCTTTGGGGAGCCAGCCATGAGCAGCTTTGGTCTTATTTGCCGAGCGAACAAAGCGAGACCAATTATGGGATGG
AGTGGATGGTGAAAGGATTATCACCCGCGAAGATCACCGTACTTGCCGCCGTTGAACAAGGCATAGTGATTGGTACCGAA
CATGGTGCTTACACTTTGTTTGATAAACAGATCCGCTTTGATTTCTCCAGTCATCGCTATGGTGAAATAGTACAAGTTGT
GGAAGATAACACTGGTCATATTTGGCTGGTCGGGGCTTATGGTGTCTTTCAGTGGCAGAACCATCAACCGCCGGCAATTG
CAGTTGAGTTAGTTGAAGAGAATATTCAGCCGCGCTGTATTGCTCAGTCAGCTCAGGGGATGTGGCTCATTTCATCGCAG
GGAATCAGTCTCTATTCGCATCAAGCTCAACTCAGTAAACACTTTGCTGCGCCTTATGGCTTGATCAGCAATGAGTTTAT
ATTAGATGCTTGTGCGGTCGGTGAAGTGTTGGATAGTTCCTTTCTTATCATGGGATCGCAATTTGGTGTGGTGCAAGCTA
ATACCCAAGCACTAGCGGTCTCTAATTTGCCCAATATTCAGATCATGTTTAGTCAAGTGAGTGTGAATCATCAGCCGAAA
CTATTGGGTTATCAGCCGGATGGTCTGTTGCAAATTGCCTATGATGATGCGATTAGTTTTCAGTTTGGGGCCTTGTCATC
GTTACGTAATCCATCGTTGGAATATAAGCTCAATGATGAGCGAGAATGGCAGCGGTTTGACTGGGCTCAGCTCAATTTTG
ATCGACTACTGCCCGGCGAATATCGTTTAAAAGTGCGTAGCGCAAATCCAACCCACCAAGATCAAACCCCGGCTATATTC
GATTTTGAGGTTCTCCCTCCTTGGTATCTGAGCCCTGCCGCTATCATTGGTTATGTGATGCTATTGGGTGGTGGTTTGTC
TTTAATGCTAAGTTGGCGAACTCGAGTCATTGTTGAGGCAAATCGACAGCTAAAAAACCAAGTCGAGCTTAAAACCAGTC
AATTGCATCATCAAACTAAAATTGTACAGAGCAGTAATCAGCAATTACGAAAGTTACTGCAAGTACATCACAATTTGTTT
GGCAAAGTATTTGAGAGTATTGATCCCGCATTACGCCATCTTTCCTCTTATGCCAAAGTGCGTGGGTGGAATGAGTTCGA
GTTGCCGTTTAATAAAGTTAAACAAGAATTAACCCAATTGCATTTCATGCATCGAGGCGAAACCCCAGAGAGTCAACGCC
ACGATTTAAATTTATTGATGGAATCGGCCTTAAAAAGTTGGCAGGAAGAATACAACAAAGCAGAAATCCAGTTGGTGTAC
CGTGGTGAAGTCTGTCTTATCGAAATTCGCCAATTTAACCTCGATATACTGTTTAATGTCGTGTTCACCGATGCGATTCG
ACGGCTTGCTAAACAGCAACAGTTATCTATCCAACTTGAGCAGAGAGATTCACAAGGCGTGCTGATTTTTTCAGATCACG
GATCAGTGATTGATAACTTCAGTGCCATTCCCGTTTCATTCAACGGTGCGTGTACTTATTCGGTGCAAGAGTTAGTACAG
CATAGTGGTGGGGAATTACGGATTTTACGCTTCGACAAGCGTAATGTTCTCGAGTTAGCGTGGCCGCTGGCCGCATTACC
CGTCACTCAGCCATTTAAGGCGCAAGCGTTATCCATCGTTGATCACATTGTGCTTGATGATGGGGAAAAAAAGTGGCTGC
GCAAAGTCAATCAGTTAATTGAGCACAATTATAGTGATTCTGATTTCACCACCTCTAGGGCGGCACAATTACTGTTTGTC
TCCGAGCGTAGTTTGCAGCGCCGTTTTAAAGCCGCAACCGGTAAAACCTTTAAAGAATCGCTCAATCAAATGCGTTTAGA
GAAGGCGTGCCAGAGTTTATTGTGTGGTGCCAGAATTGCTCAAGTTGCCTTTGATTGTGGATTTAATGACCCTTCTTATT
TTAGTCAGCGTTTTAAGCACCATTTTGGTTTATCACCGAGCCAATTTATCGAGGATCAAGAGGGTAGATAA

Domains

Predicted by InterproScan.

• Helix-turn-helix domain (HTH_18) (1035-1110)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tfoS	Vibrio cholerae O1 biovar El Tor strain E7946	66.906	99.91	0.668