Detailed information NTG0761094

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OOK74_RS02510
• Genome accession: NZ_CP113241
• Coordinates: 514796..518188 (-)
• Length: 1130 a.a.
• NCBI ID: WP_278183060.1
• Uniprot ID: -
• Organism: Vibrio sp. gvc
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 509796..523188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OOK74_RS02495	-	510248..511273 (-)	1026	WP_274722430.1	ABC transporter permease	-
OOK74_RS02500	-	511276..512262 (-)	987	WP_274722431.1	ABC transporter permease	-
OOK74_RS02505	-	512448..514118 (-)	1671	WP_274722432.1	ABC transporter substrate-binding protein	-
OOK74_RS02510	chiS	514796..518188 (-)	3393	WP_278183060.1	response regulator	Regulator
OOK74_RS02515	rsmC	518397..519419 (-)	1023	WP_278183061.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OOK74_RS02520	-	519494..520579 (-)	1086	WP_278183062.1	AI-2E family transporter	-
OOK74_RS02525	-	520615..520770 (+)	156	WP_278183063.1	hypothetical protein	-
OOK74_RS02530	hemL	520883..522175 (-)	1293	WP_278183064.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OOK74_RS02535	erpA	522454..522795 (+)	342	WP_166013584.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127685.80 Da
• Isoelectric Point: 6.0469

>NTDB_id=761094 OOK74_RS02510 WP_278183060.1 514796..518188(-) (chiS) [Vibrio sp. gvc]
MFRFYRKQKFKRLQNTLMAAFLTLSIIPLTITALFFLRSHSQDLEQQSTSYLVSVRDTKQQQVIDYMLAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLDITIEGAREHAQQRYIPGSGDQIKTSVLPQSSAYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDIDGNVVYSIYKHDNFGTNLLTGKDQATLLGQTFKRLEQMVSEQRQANEDFTPVVISDFEPQNGQQYAWLGAPI
IQQGYLHSYAMFRLPSNAITKLIADGNNHPTMQTILVGQDHRSRTLTTADMAVEKSKQVVDLALSGQRSVGTYTNTEGAN
IIAAYTPINLKSIHWALVVELPEKEAFAGIRQLEKLFVLAMLTAIVLVIIASHYLSNFITSPLLKLTWAAERVSAGDLDE
AMINTERKDEIGRLAVSFERMQRSIRDKITLIKAQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALVSGANGPLTAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSRSTRLVLELSHHLLGKKTLRI
INQVPDQPVWVSVDPQRLEQVLYNLIGNAIKYTSEGKIVISTTCMEDKVRVQVVDTGQGIPADQLEQIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMDGTLYVSSQPMVGTTFSFTLPLATQAEIEQADVIELSHFQAPDLVDPELPEQSSLPENEH
GPLLLVADDEPVNLRVLDSFLRIEGYRVHTVQDGHQVLDAVQAEKPELVLLDIMMPGMSGYQVCEKLRQDYDHAELPIIM
LTALNQPDDRVRGFDAGANDYLCKPFNKQELAARIMAHLTASKAELRRIENAQLQQELKHRAMVEASLLETQGRLLEQLE
SAPEAILCVNEEHKVRFANEAAARLFRRTPEQLKRSNAEELIAPKYLSIDQEHYCGNIDVYVEDVRQHLSADVLRLPQGS
GLQAMYIFNVGGSINAARIYNLETAVEALSSYAFEGDKDKLQKLKELGGEFTRLADKATGEYQSKQDLMRAVLVEAMTSA
LNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPRTPRWRTVLNSLDYILEHCKESGPERAHIEMQRD
KLQKLLTSSD

Nucleotide

• Length: 3393 bp

>NTDB_id=761094 OOK74_RS02510 WP_278183060.1 514796..518188(-) (chiS) [Vibrio sp. gvc]
ATGTTTAGGTTCTATCGAAAACAAAAATTCAAGCGCCTACAGAATACGCTGATGGCTGCGTTTCTGACACTGAGCATCAT
TCCACTGACGATTACCGCGCTGTTTTTTCTGCGTTCACACAGTCAAGATCTCGAACAGCAAAGTACCTCTTACCTTGTTT
CAGTACGAGATACCAAACAGCAACAAGTGATTGATTACATGTTGGCGAAAGAGTCGGAAGTGATGGGCTTTGTGCGCTCT
GAGCTCGCCTACGCCAGTGGCGGGCGTTTTTATGGTCTGGTCAATGCATTTCAACGCTTAGACATCACGATTGAAGGGGC
GCGTGAACATGCCCAACAGCGCTATATCCCTGGCTCTGGCGATCAGATCAAAACCTCAGTACTACCACAGTCGAGCGCCT
ATGTAGGCAGTGAACGTTACCGCCTACTGCATAAGCGTTATCACTGGGCATATTTGGAGTTACTTAAACGTTCCGATTTT
GATGATATTTTGTTGGTCGATATTGACGGTAACGTGGTCTATTCAATCTACAAACACGATAACTTTGGCACCAACTTACT
CACCGGAAAAGACCAAGCCACCCTACTTGGCCAAACTTTTAAACGCCTCGAACAAATGGTCAGTGAACAGCGCCAAGCCA
ATGAAGATTTCACTCCGGTGGTGATCTCTGATTTTGAACCACAAAATGGTCAACAGTACGCTTGGCTAGGTGCGCCTATC
ATCCAGCAAGGCTACCTGCACAGTTATGCGATGTTCCGCCTACCGAGTAATGCGATTACTAAATTGATTGCCGACGGCAA
TAACCACCCAACAATGCAAACTATCTTAGTCGGTCAAGATCATCGATCTCGAACCCTGACTACGGCGGATATGGCGGTTG
AAAAAAGTAAGCAAGTGGTCGATTTAGCCTTATCAGGACAACGTTCAGTTGGCACTTATACCAACACCGAGGGAGCAAAT
ATTATTGCTGCCTATACCCCCATTAATCTGAAAAGTATTCACTGGGCACTCGTGGTTGAGTTGCCAGAAAAAGAAGCGTT
TGCTGGTATACGCCAGCTAGAAAAATTGTTTGTGTTAGCGATGCTGACCGCAATTGTATTAGTGATTATCGCGTCGCATT
ACCTGTCAAACTTCATTACTTCGCCATTATTGAAACTAACCTGGGCGGCAGAACGCGTCTCGGCGGGCGATTTGGATGAA
GCGATGATCAACACCGAACGTAAAGATGAAATTGGCCGTTTAGCGGTCAGTTTTGAACGAATGCAACGTTCGATCCGTGA
CAAAATCACCCTGATCAAAGCACAAAATAAAGAGTTGGAAAGTAATCTGCTGATCATTCGTAAACAAAATGATGAGCTAC
AACTGGCTAACAAGCTGAAAGATGAATTTCTTGCCACCACCTCACACGAGTTACGCACCCCGTTACATGGCATGATCGGC
ATTGCCGAGGCGTTAGTGTCTGGTGCCAATGGCCCATTAACGGCAGCACATAAATATCAGCTTGATATCATTATTAGTAG
TGGCCAGCGCTTAGCAACCCTAGTCGATGATCTGCTTGATTATCATAAAATGCGCTATGGCGCGTTAGACATTCAACGAT
GTGCCGTCGATTTGTCGAGATCCACTCGCTTAGTACTTGAACTCTCGCATCATTTACTCGGCAAAAAAACCTTACGGATC
ATCAACCAAGTGCCAGATCAACCAGTCTGGGTGTCCGTCGACCCCCAACGCTTAGAGCAAGTTCTGTACAACTTGATTGG
TAATGCAATTAAGTACACTTCCGAAGGCAAAATTGTCATTTCGACCACCTGTATGGAAGATAAGGTACGTGTACAAGTGG
TGGATACCGGGCAAGGCATTCCAGCCGATCAACTTGAGCAGATTTTCGAACCCCTGATCCAAGCCGGTCAAGACGCCAGT
CGCTACCGCCAAGGTGCAGGCTTAGGATTATCGATCAGCCGCCAGTTGATCGAGCTAATGGATGGCACCTTGTATGTTAG
CAGTCAACCAATGGTCGGAACCACTTTCAGCTTTACCCTGCCATTAGCCACTCAAGCTGAGATCGAACAAGCGGACGTTA
TAGAACTGTCGCACTTCCAAGCCCCTGATCTGGTTGACCCAGAGCTACCAGAGCAGAGTTCATTACCGGAAAATGAACAT
GGGCCACTGCTGCTGGTCGCTGATGATGAACCTGTCAATCTAAGAGTATTAGACAGTTTTTTACGTATTGAAGGTTATCG
AGTGCATACCGTCCAAGATGGACACCAAGTACTGGATGCGGTACAAGCTGAAAAACCAGAGCTGGTATTGCTCGACATCA
TGATGCCAGGGATGAGTGGCTATCAAGTTTGTGAAAAATTAAGACAAGACTACGATCATGCCGAGTTGCCAATCATCATG
CTCACCGCACTCAACCAGCCTGATGATCGAGTGCGTGGCTTTGATGCTGGTGCAAATGACTACTTATGTAAACCGTTTAA
TAAGCAAGAGCTCGCGGCGCGAATTATGGCTCATCTGACCGCCAGTAAGGCCGAGTTACGCCGGATTGAAAATGCACAGT
TACAACAAGAGCTCAAGCATCGAGCTATGGTCGAAGCCAGTTTACTGGAAACTCAAGGACGCTTATTGGAACAGCTCGAA
TCGGCTCCCGAAGCAATTTTATGTGTCAATGAAGAACATAAAGTACGTTTTGCCAATGAAGCGGCCGCTCGCCTATTTAG
ACGCACGCCAGAGCAGCTTAAACGCTCAAATGCTGAAGAATTGATCGCCCCTAAATACCTCTCGATTGATCAAGAGCATT
ACTGCGGTAACATTGATGTTTATGTTGAAGATGTACGCCAACACCTCTCGGCCGATGTGCTGCGCTTACCACAAGGTTCC
GGCCTGCAAGCGATGTACATTTTTAATGTCGGTGGCAGTATCAACGCCGCGCGGATCTACAATTTAGAGACTGCAGTAGA
GGCGCTGTCTAGCTATGCCTTTGAGGGAGATAAAGACAAACTGCAAAAACTCAAAGAGCTCGGTGGCGAGTTTACTCGGC
TCGCCGACAAAGCGACTGGTGAGTATCAATCGAAACAAGATTTGATGCGCGCAGTATTAGTCGAAGCGATGACCAGTGCG
CTCAATTATTGGGAGAGAGTTTCTGGGCAAAGCAAATTCACCTTTGCTGAACAAAGCGGTTTATGGCGTGTCTATCTTGA
CCGTAGTACCTTACAAACTCGCACCTTGGATAAATACCTACGTATCGAAACCCTACCAAGAACACCACGTTGGAGAACCG
TACTCAACTCGCTGGATTACATCTTAGAACACTGCAAAGAATCAGGTCCGGAACGGGCTCATATTGAAATGCAGCGCGAT
AAGTTACAAAAGCTGCTCACCAGCAGCGATTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (876-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (725-835)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	91.046	99.823	0.909