Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   OTU47_RS02295 Genome accession   NZ_CP113115
Coordinates   449026..449784 (-) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain NP2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 444026..454784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OTU47_RS02270 (OTU47_02270) pth 444059..444628 (-) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -
  OTU47_RS02275 (OTU47_02275) ychF 444699..445814 (-) 1116 WP_001218708.1 redox-regulated ATPase YchF -
  OTU47_RS02280 (OTU47_02280) - 445898..446092 (-) 195 WP_000285194.1 DUF951 domain-containing protein -
  OTU47_RS02285 (OTU47_02285) dnaN 446157..447293 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  OTU47_RS02290 (OTU47_02290) dnaA 447452..448813 (-) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  OTU47_RS02295 (OTU47_02295) spo0J 449026..449784 (-) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  OTU47_RS02300 (OTU47_02300) htrA 449842..451023 (-) 1182 WP_000681601.1 S1C family serine protease Regulator
  OTU47_RS02305 (OTU47_02305) rlmH 451206..451685 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  OTU47_RS02315 (OTU47_02315) comC/comC1 451967..452092 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  OTU47_RS02320 (OTU47_02320) comD/comD1 452113..453438 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  OTU47_RS02325 (OTU47_02325) comE 453435..454179 (+) 745 Protein_455 competence system response regulator transcription factor ComE -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=760395 OTU47_RS02295 WP_000410378.1 449026..449784(-) (spo0J) [Streptococcus pneumoniae strain NP2]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=760395 OTU47_RS02295 WP_000410378.1 449026..449784(-) (spo0J) [Streptococcus pneumoniae strain NP2]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508