Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   OTU45_RS00270 Genome accession   NZ_CP113114
Coordinates   47740..48498 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain NP1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 42740..53498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OTU45_RS00240 (OTU45_00240) comE 43345..44089 (-) 745 Protein_43 competence system response regulator transcription factor ComE -
  OTU45_RS00245 (OTU45_00245) comD/comD1 44086..45411 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  OTU45_RS00250 (OTU45_00250) comC/comC1 45432..45557 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  OTU45_RS00260 (OTU45_00260) rlmH 45839..46318 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  OTU45_RS00265 (OTU45_00265) htrA 46501..47682 (+) 1182 WP_000681601.1 S1C family serine protease Regulator
  OTU45_RS00270 (OTU45_00270) spo0J 47740..48498 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  OTU45_RS00275 (OTU45_00275) dnaA 48711..50072 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  OTU45_RS00280 (OTU45_00280) dnaN 50231..51367 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  OTU45_RS00285 (OTU45_00285) - 51432..51626 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  OTU45_RS00290 (OTU45_00290) ychF 51710..52825 (+) 1116 WP_001218708.1 redox-regulated ATPase YchF -
  OTU45_RS00295 (OTU45_00295) pth 52896..53465 (+) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=760312 OTU45_RS00270 WP_000410378.1 47740..48498(+) (spo0J) [Streptococcus pneumoniae strain NP1]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=760312 OTU45_RS00270 WP_000410378.1 47740..48498(+) (spo0J) [Streptococcus pneumoniae strain NP1]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508