Detailed information NTG0760035

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: OSV63_RS18205
• Genome accession: NZ_CP113078
• Coordinates: 3754965..3755666 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain AB5075
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3749965..3760666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSV63_RS18170 (OSV63_18170)	kdsB	3750488..3751249 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OSV63_RS18175 (OSV63_18175)	-	3751261..3752241 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
OSV63_RS18180 (OSV63_18180)	-	3752253..3752594 (+)	342	WP_001183027.1	PilZ domain-containing protein	-
OSV63_RS18185 (OSV63_18185)	-	3752612..3753385 (+)	774	WP_000497300.1	TatD family hydrolase	-
OSV63_RS18190 (OSV63_18190)	-	3753423..3754031 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
OSV63_RS18195 (OSV63_18195)	-	3754041..3754595 (+)	555	WP_000841373.1	type II secretion system protein	-
OSV63_RS18200 (OSV63_18200)	xcpV	3754585..3754965 (+)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
OSV63_RS18205 (OSV63_18205)	xcpW	3754965..3755666 (+)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
OSV63_RS18210 (OSV63_18210)	gspK	3755666..3756625 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
OSV63_RS18215 (OSV63_18215)	-	3756855..3757451 (+)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
OSV63_RS18220 (OSV63_18220)	ung	3757502..3758215 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
OSV63_RS18225 (OSV63_18225)	-	3758212..3759336 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
OSV63_RS18230 (OSV63_18230)	tadA	3759343..3759846 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
OSV63_RS18235 (OSV63_18235)	-	3759916..3760359 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=760035 OSV63_RS18205 WP_000594579.1 3754965..3755666(+) (xcpW) [Acinetobacter baumannii strain AB5075]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=760035 OSV63_RS18205 WP_000594579.1 3754965..3755666(+) (xcpW) [Acinetobacter baumannii strain AB5075]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983