Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   OSV60_RS02415 Genome accession   NZ_CP113077
Coordinates   494727..495611 (+) Length   294 a.a.
NCBI ID   WP_098713993.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 86II/2C     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 489727..500611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV60_RS02390 (OSV60_02390) - 490126..491373 (-) 1248 WP_000893466.1 YihY family inner membrane protein -
  OSV60_RS02395 (OSV60_02395) wrbA 491661..492254 (+) 594 WP_213063377.1 NAD(P)H:quinone oxidoreductase -
  OSV60_RS02400 (OSV60_02400) - 492307..492882 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  OSV60_RS02405 (OSV60_02405) - 492955..493668 (-) 714 WP_000201548.1 DUF3108 domain-containing protein -
  OSV60_RS02410 (OSV60_02410) - 493825..494496 (-) 672 WP_001193960.1 hypothetical protein -
  OSV60_RS02415 (OSV60_02415) tonB2 494727..495611 (+) 885 WP_098713993.1 energy transducer TonB Machinery gene
  OSV60_RS02420 (OSV60_02420) ybeY 495701..496177 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  OSV60_RS02425 (OSV60_02425) - 496187..497275 (-) 1089 WP_000122983.1 PhoH family protein -
  OSV60_RS02430 (OSV60_02430) miaB 497313..498764 (-) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33680.56 Da        Isoelectric Point: 9.0935

>NTDB_id=759957 OSV60_RS02415 WP_098713993.1 494727..495611(+) (tonB2) [Acinetobacter baumannii strain 86II/2C]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGT
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDVNMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=759957 OSV60_RS02415 WP_098713993.1 494727..495611(+) (tonB2) [Acinetobacter baumannii strain 86II/2C]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCCCAAGCTGATCAACAAGGTTCAGGGACT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
AAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGCTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCATTTGGCCGTTTTGA
TGTAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.32

100

0.993