Detailed information NTG0075978

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H7R23_RS10325
• Genome accession: NZ_AP021936
• Coordinates: 2169267..2170022 (-)
• Length: 251 a.a.
• NCBI ID: WP_057085318.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain WP2-W18-ESBL-11
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2164267..2175022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R23_RS10295 (WP2W18E11_19950)	-	2164575..2165015 (-)	441	WP_057085613.1	SRPBCC family protein	-
H7R23_RS10300 (WP2W18E11_19960)	tadA	2165086..2165589 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
H7R23_RS10305 (WP2W18E11_19970)	hibch	2165595..2166719 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
H7R23_RS10310 (WP2W18E11_19980)	ung	2166716..2167429 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
H7R23_RS10315 (WP2W18E11_19990)	-	2167483..2168079 (-)	597	WP_017386831.1	6-pyruvoyl trahydropterin synthase family protein	-
H7R23_RS10320 (WP2W18E11_20000)	gspK	2168307..2169266 (-)	960	WP_057085316.1	type II secretion system minor pseudopilin GspK	-
H7R23_RS10325 (WP2W18E11_20010)	xcpW	2169267..2170022 (-)	756	WP_057085318.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H7R23_RS10330 (WP2W18E11_20020)	xcpV	2170022..2170402 (-)	381	WP_182917329.1	type II secretion system minor pseudopilin GspI	Machinery gene
H7R23_RS10335 (WP2W18E11_20030)	-	2170392..2170946 (-)	555	WP_039761075.1	type II secretion system protein	-
H7R23_RS10340 (WP2W18E11_20040)	-	2170953..2171561 (-)	609	WP_057085321.1	TetR/AcrR family transcriptional regulator	-
H7R23_RS10345 (WP2W18E11_20050)	ycfH	2171598..2172371 (-)	774	WP_057085323.1	TatD family hydrolase	-
H7R23_RS10350 (WP2W18E11_20060)	pilZ	2172389..2172730 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
H7R23_RS10355 (WP2W18E11_20070)	holB	2172741..2173721 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
H7R23_RS10360 (WP2W18E11_20080)	kdsB	2173735..2174496 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28819.02 Da
• Isoelectric Point: 9.7317

>NTDB_id=75978 H7R23_RS10325 WP_057085318.1 2169267..2170022(-) (xcpW) [Acinetobacter pittii strain WP2-W18-ESBL-11]
MIKNKSFRSPSSAAHLAVRSEQMMRDYSEQSSSSCVQTKLRFVNRRSGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNNSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFKKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=75978 H7R23_RS10325 WP_057085318.1 2169267..2170022(-) (xcpW) [Acinetobacter pittii strain WP2-W18-ESBL-11]
ATGATAAAGAATAAAAGTTTTCGTTCTCCAAGCTCAGCTGCACATCTTGCGGTACGATCGGAGCAGATGATGAGGGATTA
CTCCGAGCAAAGCTCTTCGTCTTGCGTTCAGACAAAGCTTCGCTTTGTTAATCGTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTCTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATAATTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAAGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

• Prokaryotic N-terminal methylation motif (N_methyl) (44-67)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	79.116	99.203	0.785