Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   H7R23_RS02490 Genome accession   NZ_AP021936
Coordinates   507369..508253 (+) Length   294 a.a.
NCBI ID   WP_032004788.1    Uniprot ID   A0A010JM84
Organism   Acinetobacter pittii strain WP2-W18-ESBL-11     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 502369..513253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R23_RS02465 (WP2W18E11_04710) - 502679..503926 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  H7R23_RS02470 (WP2W18E11_04720) wrbA 504291..504893 (+) 603 WP_005078299.1 NAD(P)H:quinone oxidoreductase -
  H7R23_RS02475 (WP2W18E11_04730) xpt 504945..505520 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  H7R23_RS02480 (WP2W18E11_04740) - 505593..506306 (-) 714 WP_182917775.1 DUF3108 domain-containing protein -
  H7R23_RS02485 (WP2W18E11_04750) - 506465..507136 (-) 672 WP_182917776.1 hypothetical protein -
  H7R23_RS02490 (WP2W18E11_04760) tonB2 507369..508253 (+) 885 WP_032004788.1 energy transducer TonB Machinery gene
  H7R23_RS02495 (WP2W18E11_04770) ybeY 508306..508782 (-) 477 WP_002119528.1 rRNA maturation RNase YbeY -
  H7R23_RS02500 (WP2W18E11_04780) phoL 508792..509880 (-) 1089 WP_002119513.1 PhoH family protein -
  H7R23_RS02505 (WP2W18E11_04790) miaB 509918..511369 (-) 1452 WP_182917777.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33565.07 Da        Isoelectric Point: 7.2040

>NTDB_id=75972 H7R23_RS02490 WP_032004788.1 507369..508253(+) (tonB2) [Acinetobacter pittii strain WP2-W18-ESBL-11]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSSSEQSTKEIAISIRPSNEPVVQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=75972 H7R23_RS02490 WP_032004788.1 507369..508253(+) (tonB2) [Acinetobacter pittii strain WP2-W18-ESBL-11]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTGTTGCTCATTCACTTTGCTATGCCTAGCTCGTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTGTTCAGGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCAGCAGCAAAGAGAACTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAAGCAAAAGCTGCGATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAGATAAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCGGCTGCTTATTTGGATAAGTTCCGTGAAAAAGTAGAGCTTTATGGCAACCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGCTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A010JM84

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

89.116

100

0.891

Multiple sequence alignment