Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   OSV61_RS16695 Genome accession   NZ_CP113069
Coordinates   3551170..3551496 (-) Length   108 a.a.
NCBI ID   WP_000801427.1    Uniprot ID   N9J3X5
Organism   Acinetobacter baumannii strain 29D2     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3546170..3556496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV61_RS16675 (OSV61_16675) - 3546270..3546899 (-) 630 WP_000219972.1 FHA domain-containing protein -
  OSV61_RS16680 (OSV61_16680) gspD 3546940..3549216 (-) 2277 WP_001196426.1 type II secretion system secretin GspD -
  OSV61_RS16685 (OSV61_16685) - 3549258..3550094 (-) 837 WP_000870031.1 type II secretion system protein N -
  OSV61_RS16690 (OSV61_16690) gspN 3550094..3550837 (-) 744 WP_000730343.1 type II secretion system protein N -
  OSV61_RS16695 (OSV61_16695) hns 3551170..3551496 (-) 327 WP_000801427.1 H-NS histone family protein Regulator
  OSV61_RS16700 (OSV61_16700) - 3551691..3552131 (-) 441 WP_000661569.1 thioesterase family protein -
  OSV61_RS16705 (OSV61_16705) - 3552139..3553332 (-) 1194 WP_000681775.1 membrane protein -
  OSV61_RS16710 (OSV61_16710) - 3553342..3554181 (-) 840 WP_001230201.1 hypothetical protein -
  OSV61_RS16715 (OSV61_16715) - 3554190..3554957 (-) 768 WP_017816285.1 uroporphyrinogen-III synthase -
  OSV61_RS16720 (OSV61_16720) hemC 3554962..3555879 (-) 918 WP_065719026.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12462.12 Da        Isoelectric Point: 5.0524

>NTDB_id=759689 OSV61_RS16695 WP_000801427.1 3551170..3551496(-) (hns) [Acinetobacter baumannii strain 29D2]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=759689 OSV61_RS16695 WP_000801427.1 3551170..3551496(-) (hns) [Acinetobacter baumannii strain 29D2]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9J3X5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

100

100

1