Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   OSV61_RS15260 Genome accession   NZ_CP113069
Coordinates   3237859..3238269 (-) Length   136 a.a.
NCBI ID   WP_002067305.1    Uniprot ID   A0A333UQE7
Organism   Acinetobacter baumannii strain 29D2     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3232859..3243269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV61_RS15230 (OSV61_15230) - 3232945..3233214 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  OSV61_RS15235 (OSV61_15235) rapZ 3233211..3234062 (-) 852 WP_000821671.1 RNase adapter RapZ -
  OSV61_RS15240 (OSV61_15240) panC 3234085..3234933 (-) 849 WP_031962697.1 pantoate--beta-alanine ligase -
  OSV61_RS15245 (OSV61_15245) panB 3234937..3235746 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  OSV61_RS15250 (OSV61_15250) folK 3235792..3236274 (-) 483 WP_000219215.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  OSV61_RS15255 (OSV61_15255) pcnB 3236271..3237734 (-) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  OSV61_RS15260 (OSV61_15260) comEA 3237859..3238269 (-) 411 WP_002067305.1 ComEA family DNA-binding protein Machinery gene
  OSV61_RS15265 (OSV61_15265) mazG 3238238..3239044 (-) 807 WP_000359488.1 nucleoside triphosphate pyrophosphohydrolase -
  OSV61_RS15270 (OSV61_15270) - 3239156..3239929 (+) 774 WP_057092818.1 SDR family oxidoreductase -
  OSV61_RS15275 (OSV61_15275) - 3239974..3242280 (-) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15668.96 Da        Isoelectric Point: 10.4475

>NTDB_id=759680 OSV61_RS15260 WP_002067305.1 3237859..3238269(-) (comEA) [Acinetobacter baumannii strain 29D2]
MQYSMRFWKNKYFLLIILCLGVISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=759680 OSV61_RS15260 WP_002067305.1 3237859..3238269(-) (comEA) [Acinetobacter baumannii strain 29D2]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A333UQE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412