Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   OSV61_RS02280 Genome accession   NZ_CP113069
Coordinates   467458..468342 (+) Length   294 a.a.
NCBI ID   WP_065718983.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 29D2     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 462458..473342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV61_RS02255 (OSV61_02255) - 462856..464103 (-) 1248 WP_000893466.1 YihY family inner membrane protein -
  OSV61_RS02260 (OSV61_02260) wrbA 464391..464984 (+) 594 WP_021510968.1 NAD(P)H:quinone oxidoreductase -
  OSV61_RS02265 (OSV61_02265) - 465037..465612 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  OSV61_RS02270 (OSV61_02270) - 465685..466398 (-) 714 WP_000201548.1 DUF3108 domain-containing protein -
  OSV61_RS02275 (OSV61_02275) - 466556..467227 (-) 672 WP_001193957.1 hypothetical protein -
  OSV61_RS02280 (OSV61_02280) tonB2 467458..468342 (+) 885 WP_065718983.1 energy transducer TonB Machinery gene
  OSV61_RS02285 (OSV61_02285) ybeY 468432..468908 (-) 477 WP_065718982.1 rRNA maturation RNase YbeY -
  OSV61_RS02290 (OSV61_02290) - 468918..470006 (-) 1089 WP_000122983.1 PhoH family protein -
  OSV61_RS02295 (OSV61_02295) miaB 470044..471495 (-) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33603.44 Da        Isoelectric Point: 8.3773

>NTDB_id=759666 OSV61_RS02280 WP_065718983.1 467458..468342(+) (tonB2) [Acinetobacter baumannii strain 29D2]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSHQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=759666 OSV61_RS02280 WP_065718983.1 467458..468342(+) (tonB2) [Acinetobacter baumannii strain 29D2]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCCCAAGCTGATCAACAAGGTTCAGGAGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCACCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAACTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.66

100

0.997