Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   P7I79_RS10745 Genome accession   NZ_CP124651
Coordinates   2317767..2318123 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 2020CK-00217     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2312767..2323123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7I79_RS10720 (P7I79_10720) fabF 2312979..2314223 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  P7I79_RS10725 (P7I79_10725) pabC 2314223..2315038 (+) 816 WP_003091129.1 aminodeoxychorismate lyase -
  P7I79_RS10730 (P7I79_10730) mltG 2315044..2316093 (+) 1050 WP_003091127.1 endolytic transglycosylase MltG -
  P7I79_RS10735 (P7I79_10735) tmk 2316122..2316754 (+) 633 WP_003122486.1 dTMP kinase -
  P7I79_RS10740 (P7I79_10740) - 2316747..2317733 (+) 987 WP_003091122.1 DNA polymerase III subunit delta' -
  P7I79_RS10745 (P7I79_10745) pilZ 2317767..2318123 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  P7I79_RS10750 (P7I79_10750) - 2318138..2318914 (+) 777 WP_023095396.1 TatD family hydrolase -
  P7I79_RS10755 (P7I79_10755) - 2319140..2320273 (-) 1134 WP_003091115.1 aminotransferase class V-fold PLP-dependent enzyme -
  P7I79_RS10760 (P7I79_10760) - 2320359..2320997 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  P7I79_RS10765 (P7I79_10765) - 2321147..2322043 (+) 897 WP_003091113.1 radical SAM protein -
  P7I79_RS10770 (P7I79_10770) - 2322108..2322740 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=759648 P7I79_RS10745 WP_003091119.1 2317767..2318123(+) (pilZ) [Pseudomonas aeruginosa strain 2020CK-00217]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=759648 P7I79_RS10745 WP_003091119.1 2317767..2318123(+) (pilZ) [Pseudomonas aeruginosa strain 2020CK-00217]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449