Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   OS088_RS12040 Genome accession   NZ_CP113051
Coordinates   2343496..2344383 (-) Length   295 a.a.
NCBI ID   WP_000143420.1    Uniprot ID   A0A2S6DP21
Organism   Staphylococcus aureus strain Viktor     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2338496..2349383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS088_RS12010 - 2338514..2338602 (+) 89 Protein_2322 hypothetical protein -
  OS088_RS12015 - 2338710..2339207 (-) 498 WP_001065267.1 glutathione peroxidase -
  OS088_RS12020 - 2339217..2339477 (-) 261 WP_209205822.1 hypothetical protein -
  OS088_RS12025 - 2339859..2339972 (-) 114 WP_072468803.1 hypothetical protein -
  OS088_RS12030 - 2340636..2342636 (-) 2001 WP_267814178.1 ABC transporter permease -
  OS088_RS12035 - 2342633..2343388 (-) 756 WP_154283810.1 ABC transporter ATP-binding protein -
  OS088_RS12040 braS 2343496..2344383 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  OS088_RS12045 braR 2344394..2345059 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  OS088_RS12050 - 2345085..2345285 (-) 201 WP_154283811.1 hypothetical protein -
  OS088_RS12055 - 2345483..2346907 (+) 1425 WP_000953731.1 alkaline phosphatase -
  OS088_RS14530 - 2346967..2347068 (-) 102 WP_000731972.1 SE2200 family small protein -
  OS088_RS12065 - 2347190..2347645 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  OS088_RS12070 - 2347891..2348652 (-) 762 WP_154283812.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34045.32 Da        Isoelectric Point: 5.8962

>NTDB_id=759602 OS088_RS12040 WP_000143420.1 2343496..2344383(-) (braS) [Staphylococcus aureus strain Viktor]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=759602 OS088_RS12040 WP_000143420.1 2343496..2344383(-) (braS) [Staphylococcus aureus strain Viktor]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGTTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAGGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATATGTAAAAGATAATGGTATCGGTATTAGTGAGGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DP21

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993