Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   OS087_RS01195 Genome accession   NZ_CP113047
Coordinates   220641..221684 (-) Length   347 a.a.
NCBI ID   WP_267830476.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Sett     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 215641..226684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS087_RS01165 - 216063..217319 (-) 1257 WP_001789555.1 aminopeptidase -
  OS087_RS01170 - 217322..217522 (-) 201 WP_000180460.1 DUF1128 family protein -
  OS087_RS01175 - 217669..218133 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  OS087_RS01180 - 218140..218415 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  OS087_RS01185 - 218693..219910 (+) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  OS087_RS01190 vraR 220022..220651 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  OS087_RS01195 vraS 220641..221684 (-) 1044 WP_267830476.1 sensor histidine kinase Regulator
  OS087_RS01200 liaF 221681..222382 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  OS087_RS01205 - 222397..222783 (-) 387 WP_001110179.1 hypothetical protein -
  OS087_RS01210 map 223000..223758 (-) 759 WP_086353412.1 type I methionyl aminopeptidase -
  OS087_RS01215 - 224348..225334 (+) 987 WP_000999713.1 FUSC family protein -
  OS087_RS01220 - 225824..226237 (-) 414 WP_001566709.1 hypothetical protein -
  OS087_RS01225 - 226266..226376 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40078.54 Da        Isoelectric Point: 6.0577

>NTDB_id=759483 OS087_RS01195 WP_267830476.1 220641..221684(-) (vraS) [Staphylococcus aureus strain Sett]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFFFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=759483 OS087_RS01195 WP_267830476.1 220641..221684(-) (vraS) [Staphylococcus aureus strain Sett]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTTTTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997