Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   OS079_RS00910 Genome accession   NZ_CP113042
Coordinates   151338..152054 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain Seraphine     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 146338..157054
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS079_RS00880 - 146557..147183 (+) 627 WP_000522384.1 nitroreductase family protein -
  OS079_RS00885 - 147544..148329 (+) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  OS079_RS15175 hld 148926..149006 (-) 81 WP_000046022.1 delta-hemolysin -
  OS079_RS00895 agrB 149296..149865 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  OS079_RS00900 agrD 149862..150002 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  OS079_RS00905 agrC 150027..151319 (+) 1293 WP_001549202.1 quorum-sensing sensor histidine kinase AgrC -
  OS079_RS00910 agrA 151338..152054 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  OS079_RS00915 - 152126..152233 (+) 108 WP_001790167.1 hypothetical protein -
  OS079_RS00920 - 152421..153380 (-) 960 WP_001253312.1 carbohydrate kinase family protein -
  OS079_RS00925 - 153377..154861 (-) 1485 WP_267837938.1 sucrose-6-phosphate hydrolase -
  OS079_RS00930 - 155010..155960 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=759398 OS079_RS00910 WP_000688492.1 151338..152054(+) (agrA) [Staphylococcus aureus strain Seraphine]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=759398 OS079_RS00910 WP_000688492.1 151338..152054(+) (agrA) [Staphylococcus aureus strain Seraphine]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1