Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   OS079_RS00155 Genome accession   NZ_CP113042
Coordinates   28620..29663 (-) Length   347 a.a.
NCBI ID   WP_267830476.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Seraphine     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 23620..34663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS079_RS00125 - 24038..25294 (-) 1257 WP_001795438.1 aminopeptidase -
  OS079_RS00130 - 25297..25497 (-) 201 WP_000180461.1 DUF1128 family protein -
  OS079_RS00135 - 25644..26108 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  OS079_RS00140 - 26115..26390 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  OS079_RS00145 - 26668..27885 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  OS079_RS00150 vraR 28001..28630 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  OS079_RS00155 vraS 28620..29663 (-) 1044 WP_267830476.1 sensor histidine kinase Regulator
  OS079_RS00160 liaF 29660..30361 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  OS079_RS00165 - 30376..30762 (-) 387 WP_001110179.1 hypothetical protein -
  OS079_RS00170 map 30979..31737 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  OS079_RS00175 - 32265..33251 (+) 987 WP_000999713.1 FUSC family protein -
  OS079_RS00180 - 33741..34154 (-) 414 WP_001549145.1 hypothetical protein -
  OS079_RS00185 - 34183..34293 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40078.54 Da        Isoelectric Point: 6.0577

>NTDB_id=759396 OS079_RS00155 WP_267830476.1 28620..29663(-) (vraS) [Staphylococcus aureus strain Seraphine]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFFFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=759396 OS079_RS00155 WP_267830476.1 28620..29663(-) (vraS) [Staphylococcus aureus strain Seraphine]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTTTTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGTGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997