Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   OS090_RS06270 Genome accession   NZ_CP113018
Coordinates   1210601..1211317 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain Taliyah     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1205601..1216317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS090_RS06250 - 1206695..1207645 (+) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -
  OS090_RS06255 - 1207794..1209278 (+) 1485 WP_000141417.1 sucrose-6-phosphate hydrolase -
  OS090_RS06260 - 1209275..1210234 (+) 960 WP_001253313.1 carbohydrate kinase family protein -
  OS090_RS06265 - 1210422..1210529 (-) 108 WP_001790167.1 hypothetical protein -
  OS090_RS06270 agrA 1210601..1211317 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  OS090_RS06275 agrC 1211336..1212628 (-) 1293 WP_014532426.1 quorum-sensing sensor histidine kinase AgrC -
  OS090_RS06280 agrD 1212653..1212793 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  OS090_RS06285 agrB 1212790..1213359 (-) 570 WP_001105707.1 accessory gene regulator AgrB -
  OS090_RS16670 hld 1213649..1213729 (+) 81 WP_000046022.1 delta-hemolysin -
  OS090_RS06295 - 1214326..1215111 (-) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  OS090_RS06300 - 1215472..1216098 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=759144 OS090_RS06270 WP_000688492.1 1210601..1211317(-) (agrA) [Staphylococcus aureus strain Taliyah]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=759144 OS090_RS06270 WP_000688492.1 1210601..1211317(-) (agrA) [Staphylococcus aureus strain Taliyah]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1