Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   P7I87_RS12705 Genome accession   NZ_CP124632
Coordinates   2677856..2678212 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain 2021CK-01162     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2672856..2683212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7I87_RS12680 (P7I87_12680) fabF 2673069..2674313 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  P7I87_RS12685 (P7I87_12685) pabC 2674313..2675127 (+) 815 Protein_2504 aminodeoxychorismate lyase -
  P7I87_RS12690 (P7I87_12690) mltG 2675133..2676182 (+) 1050 WP_003091127.1 endolytic transglycosylase MltG -
  P7I87_RS12695 (P7I87_12695) tmk 2676211..2676843 (+) 633 WP_003122486.1 dTMP kinase -
  P7I87_RS12700 (P7I87_12700) - 2676836..2677822 (+) 987 WP_003091122.1 DNA polymerase III subunit delta' -
  P7I87_RS12705 (P7I87_12705) pilZ 2677856..2678212 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  P7I87_RS12710 (P7I87_12710) - 2678227..2679003 (+) 777 WP_023095396.1 TatD family hydrolase -
  P7I87_RS12715 (P7I87_12715) - 2679226..2680359 (-) 1134 WP_003091115.1 aminotransferase class V-fold PLP-dependent enzyme -
  P7I87_RS12720 (P7I87_12720) - 2680445..2681083 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  P7I87_RS12725 (P7I87_12725) - 2681233..2682129 (+) 897 WP_003091113.1 radical SAM protein -
  P7I87_RS12730 (P7I87_12730) - 2682194..2682826 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=759060 P7I87_RS12705 WP_003091119.1 2677856..2678212(+) (pilZ) [Pseudomonas aeruginosa strain 2021CK-01162]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=759060 P7I87_RS12705 WP_003091119.1 2677856..2678212(+) (pilZ) [Pseudomonas aeruginosa strain 2021CK-01162]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449