Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MTX27_RS08005 Genome accession   NZ_CP112980
Coordinates   1683205..1683831 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei subsp. xiangfangensis strain CNCI 7     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1678205..1688831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTX27_RS07985 (MTX27_07980) - 1678604..1680364 (-) 1761 WP_032608967.1 Lon protease family protein -
  MTX27_RS07990 (MTX27_07985) matP 1680551..1681003 (+) 453 WP_283503294.1 macrodomain Ter protein MatP -
  MTX27_RS07995 (MTX27_07990) ompA 1681069..1682121 (-) 1053 WP_017694761.1 porin OmpA -
  MTX27_RS08000 (MTX27_07995) sulA 1682478..1682987 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  MTX27_RS08005 (MTX27_08000) sxy/tfoX 1683205..1683831 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  MTX27_RS08010 (MTX27_08005) yccS 1683788..1685950 (-) 2163 WP_100154684.1 YccS family putative transporter -
  MTX27_RS08015 (MTX27_08010) - 1685969..1686415 (-) 447 WP_003858149.1 YccF domain-containing protein -
  MTX27_RS08020 (MTX27_08015) helD 1686538..1688592 (+) 2055 WP_058663369.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=758886 MTX27_RS08005 WP_023315767.1 1683205..1683831(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain CNCI 7]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=758886 MTX27_RS08005 WP_023315767.1 1683205..1683831(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain CNCI 7]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572