Detailed information
Bioinformatically predicted
Overview
| Name | rec2 | Type | Machinery gene |
| Locus tag | OR608_RS05075 | Genome accession | NZ_CP112892 |
| Coordinates | 1061818..1064211 (-) | Length | 797 a.a. |
| NCBI ID | WP_164905894.1 | Uniprot ID | - |
| Organism | Pasteurella multocida strain PF14 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1020701..1066539 | 1061818..1064211 | within | 0 |
Gene organization within MGE regions
Location: 1020701..1066539
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OR608_RS04830 (OR608_04830) | - | 1020701..1022113 (-) | 1413 | WP_076090519.1 | type II and III secretion system protein family protein | - |
| OR608_RS04835 (OR608_04835) | - | 1022110..1022922 (-) | 813 | WP_010906886.1 | SAF domain-containing protein | - |
| OR608_RS04840 (OR608_04840) | - | 1022965..1023357 (-) | 393 | WP_076090521.1 | prepilin peptidase | - |
| OR608_RS04845 (OR608_04845) | - | 1023422..1023604 (-) | 183 | WP_076090523.1 | Flp family type IVb pilin | - |
| OR608_RS04850 (OR608_04850) | - | 1023705..1023929 (-) | 225 | WP_010906888.1 | Flp family type IVb pilin | - |
| OR608_RS04855 (OR608_04855) | - | 1025094..1026116 (-) | 1023 | WP_015981969.1 | site-specific integrase | - |
| OR608_RS04860 (OR608_04860) | - | 1026119..1026571 (-) | 453 | WP_078801975.1 | hypothetical protein | - |
| OR608_RS04865 (OR608_04865) | - | 1026571..1027146 (-) | 576 | WP_015981971.1 | phage repressor protein CI | - |
| OR608_RS04870 (OR608_04870) | - | 1027263..1027475 (+) | 213 | WP_078801976.1 | hypothetical protein | - |
| OR608_RS04875 (OR608_04875) | - | 1027547..1027789 (-) | 243 | WP_016533509.1 | hypothetical protein | - |
| OR608_RS04880 (OR608_04880) | - | 1028043..1028378 (+) | 336 | WP_078801977.1 | hypothetical protein | - |
| OR608_RS04885 (OR608_04885) | - | 1028359..1028568 (+) | 210 | WP_078801978.1 | hypothetical protein | - |
| OR608_RS04890 (OR608_04890) | - | 1028583..1028834 (+) | 252 | WP_016570164.1 | hypothetical protein | - |
| OR608_RS04895 (OR608_04895) | - | 1028840..1029109 (+) | 270 | WP_005725397.1 | hypothetical protein | - |
| OR608_RS04900 (OR608_04900) | - | 1029139..1031532 (+) | 2394 | WP_266200003.1 | replication endonuclease | - |
| OR608_RS04905 (OR608_04905) | - | 1031546..1031797 (+) | 252 | WP_016533340.1 | hypothetical protein | - |
| OR608_RS04910 (OR608_04910) | - | 1031800..1032066 (+) | 267 | WP_266200004.1 | hypothetical protein | - |
| OR608_RS04915 (OR608_04915) | - | 1032035..1032571 (+) | 537 | WP_016533342.1 | phage N-6-adenine-methyltransferase | - |
| OR608_RS04920 (OR608_04920) | - | 1032668..1032943 (-) | 276 | WP_005725620.1 | ogr/Delta-like zinc finger family protein | - |
| OR608_RS04925 (OR608_04925) | - | 1033010..1034050 (-) | 1041 | WP_016570163.1 | phage portal protein | - |
| OR608_RS04930 (OR608_04930) | - | 1034055..1035863 (-) | 1809 | WP_266200005.1 | terminase ATPase subunit family protein | - |
| OR608_RS04935 (OR608_04935) | - | 1036068..1036952 (+) | 885 | WP_016533333.1 | GPO family capsid scaffolding protein | - |
| OR608_RS04940 (OR608_04940) | - | 1036957..1037985 (+) | 1029 | WP_016533334.1 | phage major capsid protein, P2 family | - |
| OR608_RS04945 (OR608_04945) | - | 1037992..1038864 (+) | 873 | WP_266200006.1 | terminase endonuclease subunit | - |
| OR608_RS04950 (OR608_04950) | - | 1038837..1039289 (+) | 453 | WP_016533336.1 | head completion/stabilization protein | - |
| OR608_RS04955 (OR608_04955) | - | 1039286..1039819 (+) | 534 | WP_016533337.1 | phage tail protein | - |
| OR608_RS04960 (OR608_04960) | - | 1039816..1040505 (+) | 690 | WP_016570162.1 | hypothetical protein | - |
| OR608_RS04965 (OR608_04965) | - | 1040524..1041654 (+) | 1131 | WP_016533243.1 | DUF2586 domain-containing protein | - |
| OR608_RS04970 (OR608_04970) | - | 1041659..1042111 (+) | 453 | WP_016533244.1 | DUF2597 family protein | - |
| OR608_RS04975 (OR608_04975) | - | 1042191..1042403 (+) | 213 | WP_016533245.1 | phage holin | - |
| OR608_RS04980 (OR608_04980) | - | 1042390..1042941 (+) | 552 | WP_015981996.1 | lysozyme | - |
| OR608_RS04985 (OR608_04985) | - | 1042938..1043324 (+) | 387 | WP_016533246.1 | hypothetical protein | - |
| OR608_RS12370 | lysC | 1043230..1043451 (+) | 222 | WP_369678675.1 | Rz1-like lysis system protein LysC | - |
| OR608_RS04990 (OR608_04990) | - | 1043458..1043766 (+) | 309 | WP_015981998.1 | putative phage tail assembly chaperone | - |
| OR608_RS12375 | - | 1043823..1043945 (+) | 123 | WP_016533247.1 | DUF6890 family protein | - |
| OR608_RS04995 (OR608_04995) | - | 1043959..1046082 (+) | 2124 | WP_016533248.1 | phage tail tape measure protein | - |
| OR608_RS05000 (OR608_05000) | - | 1046086..1046424 (+) | 339 | WP_005725175.1 | DUF2590 family protein | - |
| OR608_RS05005 (OR608_05005) | - | 1046417..1047583 (+) | 1167 | WP_016533249.1 | baseplate J/gp47 family protein | - |
| OR608_RS05010 (OR608_05010) | - | 1047583..1048176 (+) | 594 | WP_230491938.1 | phage tail protein | - |
| OR608_RS05015 (OR608_05015) | - | 1048214..1051069 (+) | 2856 | WP_266200008.1 | phage tail protein | - |
| OR608_RS05020 (OR608_05020) | - | 1051080..1051844 (+) | 765 | WP_016533395.1 | hypothetical protein | - |
| OR608_RS05025 (OR608_05025) | - | 1051831..1052403 (+) | 573 | WP_071523714.1 | hypothetical protein | - |
| OR608_RS05030 (OR608_05030) | - | 1052400..1054001 (+) | 1602 | WP_266200009.1 | hypothetical protein | - |
| OR608_RS05045 (OR608_05045) | pgsA | 1055523..1056080 (-) | 558 | WP_005751628.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| OR608_RS05050 (OR608_05050) | uvrC | 1056176..1058011 (-) | 1836 | WP_078737851.1 | excinuclease ABC subunit UvrC | - |
| OR608_RS05055 (OR608_05055) | kdsB | 1058036..1058812 (-) | 777 | WP_076090527.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| OR608_RS05060 (OR608_05060) | - | 1058814..1058996 (-) | 183 | WP_076090529.1 | Trm112 family protein | - |
| OR608_RS05065 (OR608_05065) | lpxK | 1059008..1059985 (-) | 978 | WP_076090531.1 | tetraacyldisaccharide 4'-kinase | - |
| OR608_RS05070 (OR608_05070) | msbA | 1060017..1061765 (-) | 1749 | WP_078737852.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| OR608_RS05075 (OR608_05075) | rec2 | 1061818..1064211 (-) | 2394 | WP_164905894.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| OR608_RS05080 (OR608_05080) | dksA | 1064508..1064945 (+) | 438 | WP_005716860.1 | RNA polymerase-binding protein DksA | - |
| OR608_RS05085 (OR608_05085) | pcnB | 1065034..1066539 (+) | 1506 | WP_016533715.1 | polynucleotide adenylyltransferase PcnB | - |
Sequence
Protein
Download Length: 797 a.a. Molecular weight: 91190.58 Da Isoelectric Point: 9.8258
>NTDB_id=758705 OR608_RS05075 WP_164905894.1 1061818..1064211(-) (rec2) [Pasteurella multocida strain PF14]
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
Nucleotide
Download Length: 2394 bp
>NTDB_id=758705 OR608_RS05075 WP_164905894.1 1061818..1064211(-) (rec2) [Pasteurella multocida strain PF14]
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rec2 | Haemophilus influenzae Rd KW20 |
51.003 |
100 |
0.511 |