Detailed information
Bioinformatically predicted
Overview
| Name | rec2 | Type | Machinery gene |
| Locus tag | OR603_RS05065 | Genome accession | NZ_CP112891 |
| Coordinates | 1061836..1064229 (-) | Length | 797 a.a. |
| NCBI ID | WP_164905894.1 | Uniprot ID | - |
| Organism | Pasteurella multocida strain PF12 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1020719..1066557 | 1061836..1064229 | within | 0 |
Gene organization within MGE regions
Location: 1020719..1066557
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OR603_RS04820 (OR603_04820) | - | 1020719..1022131 (-) | 1413 | WP_076090519.1 | type II and III secretion system protein family protein | - |
| OR603_RS04825 (OR603_04825) | - | 1022128..1022940 (-) | 813 | WP_010906886.1 | SAF domain-containing protein | - |
| OR603_RS04830 (OR603_04830) | - | 1022983..1023375 (-) | 393 | WP_076090521.1 | prepilin peptidase | - |
| OR603_RS04835 (OR603_04835) | - | 1023440..1023622 (-) | 183 | WP_076090523.1 | Flp family type IVb pilin | - |
| OR603_RS04840 (OR603_04840) | - | 1023723..1023947 (-) | 225 | WP_010906888.1 | Flp family type IVb pilin | - |
| OR603_RS04845 (OR603_04845) | - | 1025112..1026134 (-) | 1023 | WP_015981969.1 | site-specific integrase | - |
| OR603_RS04850 (OR603_04850) | - | 1026137..1026589 (-) | 453 | WP_078801975.1 | hypothetical protein | - |
| OR603_RS04855 (OR603_04855) | - | 1026589..1027164 (-) | 576 | WP_015981971.1 | phage repressor protein CI | - |
| OR603_RS04860 (OR603_04860) | - | 1027281..1027493 (+) | 213 | WP_078801976.1 | hypothetical protein | - |
| OR603_RS04865 (OR603_04865) | - | 1027565..1027807 (-) | 243 | WP_016533509.1 | hypothetical protein | - |
| OR603_RS04870 (OR603_04870) | - | 1028061..1028396 (+) | 336 | WP_078801977.1 | hypothetical protein | - |
| OR603_RS04875 (OR603_04875) | - | 1028377..1028586 (+) | 210 | WP_078801978.1 | hypothetical protein | - |
| OR603_RS04880 (OR603_04880) | - | 1028601..1028852 (+) | 252 | WP_016570164.1 | hypothetical protein | - |
| OR603_RS04885 (OR603_04885) | - | 1028858..1029127 (+) | 270 | WP_005725397.1 | hypothetical protein | - |
| OR603_RS04890 (OR603_04890) | - | 1029157..1031550 (+) | 2394 | WP_266200003.1 | replication endonuclease | - |
| OR603_RS04895 (OR603_04895) | - | 1031564..1031815 (+) | 252 | WP_016533340.1 | hypothetical protein | - |
| OR603_RS04900 (OR603_04900) | - | 1031818..1032084 (+) | 267 | WP_266200004.1 | hypothetical protein | - |
| OR603_RS04905 (OR603_04905) | - | 1032053..1032589 (+) | 537 | WP_016533342.1 | phage N-6-adenine-methyltransferase | - |
| OR603_RS04910 (OR603_04910) | - | 1032686..1032961 (-) | 276 | WP_005725620.1 | ogr/Delta-like zinc finger family protein | - |
| OR603_RS04915 (OR603_04915) | - | 1033028..1034068 (-) | 1041 | WP_016570163.1 | phage portal protein | - |
| OR603_RS04920 (OR603_04920) | - | 1034073..1035881 (-) | 1809 | WP_266200005.1 | terminase ATPase subunit family protein | - |
| OR603_RS04925 (OR603_04925) | - | 1036086..1036970 (+) | 885 | WP_016533333.1 | GPO family capsid scaffolding protein | - |
| OR603_RS04930 (OR603_04930) | - | 1036975..1038003 (+) | 1029 | WP_016533334.1 | phage major capsid protein, P2 family | - |
| OR603_RS04935 (OR603_04935) | - | 1038010..1038882 (+) | 873 | WP_266200006.1 | terminase endonuclease subunit | - |
| OR603_RS04940 (OR603_04940) | - | 1038855..1039307 (+) | 453 | WP_016533336.1 | head completion/stabilization protein | - |
| OR603_RS04945 (OR603_04945) | - | 1039304..1039837 (+) | 534 | WP_016533337.1 | phage tail protein | - |
| OR603_RS04950 (OR603_04950) | - | 1039834..1040523 (+) | 690 | WP_016570162.1 | hypothetical protein | - |
| OR603_RS04955 (OR603_04955) | - | 1040542..1041672 (+) | 1131 | WP_016533243.1 | DUF2586 domain-containing protein | - |
| OR603_RS04960 (OR603_04960) | - | 1041677..1042129 (+) | 453 | WP_016533244.1 | DUF2597 family protein | - |
| OR603_RS04965 (OR603_04965) | - | 1042209..1042421 (+) | 213 | WP_016533245.1 | phage holin | - |
| OR603_RS04970 (OR603_04970) | - | 1042408..1042959 (+) | 552 | WP_015981996.1 | lysozyme | - |
| OR603_RS04975 (OR603_04975) | - | 1042956..1043342 (+) | 387 | WP_016533246.1 | hypothetical protein | - |
| OR603_RS12405 | lysC | 1043248..1043469 (+) | 222 | WP_369678675.1 | Rz1-like lysis system protein LysC | - |
| OR603_RS04980 (OR603_04980) | - | 1043476..1043784 (+) | 309 | WP_015981998.1 | putative phage tail assembly chaperone | - |
| OR603_RS12410 | - | 1043841..1043963 (+) | 123 | WP_016533247.1 | DUF6890 family protein | - |
| OR603_RS04985 (OR603_04985) | - | 1043977..1046100 (+) | 2124 | WP_016533248.1 | phage tail tape measure protein | - |
| OR603_RS04990 (OR603_04990) | - | 1046104..1046442 (+) | 339 | WP_005725175.1 | DUF2590 family protein | - |
| OR603_RS04995 (OR603_04995) | - | 1046435..1047601 (+) | 1167 | WP_016533249.1 | baseplate J/gp47 family protein | - |
| OR603_RS05000 (OR603_05000) | - | 1047601..1048194 (+) | 594 | WP_230491938.1 | phage tail protein | - |
| OR603_RS05005 (OR603_05005) | - | 1048232..1051087 (+) | 2856 | WP_266200008.1 | phage tail protein | - |
| OR603_RS05010 (OR603_05010) | - | 1051098..1051862 (+) | 765 | WP_016533395.1 | hypothetical protein | - |
| OR603_RS05015 (OR603_05015) | - | 1051849..1052421 (+) | 573 | WP_071523714.1 | hypothetical protein | - |
| OR603_RS05020 (OR603_05020) | - | 1052418..1054019 (+) | 1602 | WP_266200009.1 | hypothetical protein | - |
| OR603_RS05035 (OR603_05035) | pgsA | 1055541..1056098 (-) | 558 | WP_005751628.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| OR603_RS05040 (OR603_05040) | uvrC | 1056194..1058029 (-) | 1836 | WP_078737851.1 | excinuclease ABC subunit UvrC | - |
| OR603_RS05045 (OR603_05045) | kdsB | 1058054..1058830 (-) | 777 | WP_076090527.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| OR603_RS05050 (OR603_05050) | - | 1058832..1059014 (-) | 183 | WP_076090529.1 | Trm112 family protein | - |
| OR603_RS05055 (OR603_05055) | lpxK | 1059026..1060003 (-) | 978 | WP_076090531.1 | tetraacyldisaccharide 4'-kinase | - |
| OR603_RS05060 (OR603_05060) | msbA | 1060035..1061783 (-) | 1749 | WP_078737852.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| OR603_RS05065 (OR603_05065) | rec2 | 1061836..1064229 (-) | 2394 | WP_164905894.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| OR603_RS05070 (OR603_05070) | dksA | 1064526..1064963 (+) | 438 | WP_005716860.1 | RNA polymerase-binding protein DksA | - |
| OR603_RS05075 (OR603_05075) | pcnB | 1065052..1066557 (+) | 1506 | WP_016533715.1 | polynucleotide adenylyltransferase PcnB | - |
Sequence
Protein
Download Length: 797 a.a. Molecular weight: 91190.58 Da Isoelectric Point: 9.8258
>NTDB_id=758681 OR603_RS05065 WP_164905894.1 1061836..1064229(-) (rec2) [Pasteurella multocida strain PF12]
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
Nucleotide
Download Length: 2394 bp
>NTDB_id=758681 OR603_RS05065 WP_164905894.1 1061836..1064229(-) (rec2) [Pasteurella multocida strain PF12]
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rec2 | Haemophilus influenzae Rd KW20 |
51.003 |
100 |
0.511 |