Detailed information
Bioinformatically predicted
Overview
| Name | rec2 | Type | Machinery gene |
| Locus tag | ORU26_RS05065 | Genome accession | NZ_CP111146 |
| Coordinates | 1061833..1064226 (-) | Length | 797 a.a. |
| NCBI ID | WP_164905894.1 | Uniprot ID | - |
| Organism | Pasteurella multocida strain PF10 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1020716..1066554 | 1061833..1064226 | within | 0 |
Gene organization within MGE regions
Location: 1020716..1066554
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORU26_RS04820 (ORU26_04820) | - | 1020716..1022128 (-) | 1413 | WP_076090519.1 | type II and III secretion system protein family protein | - |
| ORU26_RS04825 (ORU26_04825) | - | 1022125..1022937 (-) | 813 | WP_010906886.1 | SAF domain-containing protein | - |
| ORU26_RS04830 (ORU26_04830) | - | 1022980..1023372 (-) | 393 | WP_076090521.1 | prepilin peptidase | - |
| ORU26_RS04835 (ORU26_04835) | - | 1023437..1023619 (-) | 183 | WP_076090523.1 | Flp family type IVb pilin | - |
| ORU26_RS04840 (ORU26_04840) | - | 1023720..1023944 (-) | 225 | WP_010906888.1 | Flp family type IVb pilin | - |
| ORU26_RS04845 (ORU26_04845) | - | 1025109..1026131 (-) | 1023 | WP_015981969.1 | site-specific integrase | - |
| ORU26_RS04850 (ORU26_04850) | - | 1026134..1026586 (-) | 453 | WP_078801975.1 | hypothetical protein | - |
| ORU26_RS04855 (ORU26_04855) | - | 1026586..1027161 (-) | 576 | WP_015981971.1 | phage repressor protein CI | - |
| ORU26_RS04860 (ORU26_04860) | - | 1027278..1027490 (+) | 213 | WP_078801976.1 | hypothetical protein | - |
| ORU26_RS04865 (ORU26_04865) | - | 1027562..1027804 (-) | 243 | WP_016533509.1 | hypothetical protein | - |
| ORU26_RS04870 (ORU26_04870) | - | 1028058..1028393 (+) | 336 | WP_078801977.1 | hypothetical protein | - |
| ORU26_RS04875 (ORU26_04875) | - | 1028374..1028583 (+) | 210 | WP_078801978.1 | hypothetical protein | - |
| ORU26_RS04880 (ORU26_04880) | - | 1028598..1028849 (+) | 252 | WP_016570164.1 | hypothetical protein | - |
| ORU26_RS04885 (ORU26_04885) | - | 1028855..1029124 (+) | 270 | WP_005725397.1 | hypothetical protein | - |
| ORU26_RS04890 (ORU26_04890) | - | 1029154..1031547 (+) | 2394 | WP_266200003.1 | replication endonuclease | - |
| ORU26_RS04895 (ORU26_04895) | - | 1031561..1031812 (+) | 252 | WP_016533340.1 | hypothetical protein | - |
| ORU26_RS04900 (ORU26_04900) | - | 1031815..1032081 (+) | 267 | WP_266200004.1 | hypothetical protein | - |
| ORU26_RS04905 (ORU26_04905) | - | 1032050..1032586 (+) | 537 | WP_016533342.1 | phage N-6-adenine-methyltransferase | - |
| ORU26_RS04910 (ORU26_04910) | - | 1032683..1032958 (-) | 276 | WP_005725620.1 | ogr/Delta-like zinc finger family protein | - |
| ORU26_RS04915 (ORU26_04915) | - | 1033025..1034065 (-) | 1041 | WP_016570163.1 | phage portal protein | - |
| ORU26_RS04920 (ORU26_04920) | - | 1034070..1035878 (-) | 1809 | WP_266200005.1 | terminase ATPase subunit family protein | - |
| ORU26_RS04925 (ORU26_04925) | - | 1036083..1036967 (+) | 885 | WP_016533333.1 | GPO family capsid scaffolding protein | - |
| ORU26_RS04930 (ORU26_04930) | - | 1036972..1038000 (+) | 1029 | WP_016533334.1 | phage major capsid protein, P2 family | - |
| ORU26_RS04935 (ORU26_04935) | - | 1038007..1038879 (+) | 873 | WP_266200006.1 | terminase endonuclease subunit | - |
| ORU26_RS04940 (ORU26_04940) | - | 1038852..1039304 (+) | 453 | WP_016533336.1 | head completion/stabilization protein | - |
| ORU26_RS04945 (ORU26_04945) | - | 1039301..1039834 (+) | 534 | WP_016533337.1 | phage tail protein | - |
| ORU26_RS04950 (ORU26_04950) | - | 1039831..1040520 (+) | 690 | WP_016570162.1 | hypothetical protein | - |
| ORU26_RS04955 (ORU26_04955) | - | 1040539..1041669 (+) | 1131 | WP_016533243.1 | DUF2586 domain-containing protein | - |
| ORU26_RS04960 (ORU26_04960) | - | 1041674..1042126 (+) | 453 | WP_016533244.1 | DUF2597 family protein | - |
| ORU26_RS04965 (ORU26_04965) | - | 1042206..1042418 (+) | 213 | WP_016533245.1 | phage holin | - |
| ORU26_RS04970 (ORU26_04970) | - | 1042405..1042956 (+) | 552 | WP_015981996.1 | lysozyme | - |
| ORU26_RS04975 (ORU26_04975) | - | 1042953..1043339 (+) | 387 | WP_016533246.1 | hypothetical protein | - |
| ORU26_RS12350 | lysC | 1043245..1043466 (+) | 222 | WP_369678675.1 | Rz1-like lysis system protein LysC | - |
| ORU26_RS04980 (ORU26_04980) | - | 1043473..1043781 (+) | 309 | WP_015981998.1 | putative phage tail assembly chaperone | - |
| ORU26_RS12355 | - | 1043838..1043960 (+) | 123 | WP_016533247.1 | DUF6890 family protein | - |
| ORU26_RS04985 (ORU26_04985) | - | 1043974..1046097 (+) | 2124 | WP_016533248.1 | phage tail tape measure protein | - |
| ORU26_RS04990 (ORU26_04990) | - | 1046101..1046439 (+) | 339 | WP_005725175.1 | DUF2590 family protein | - |
| ORU26_RS04995 (ORU26_04995) | - | 1046432..1047598 (+) | 1167 | WP_016533249.1 | baseplate J/gp47 family protein | - |
| ORU26_RS05000 (ORU26_05000) | - | 1047598..1048191 (+) | 594 | WP_230491938.1 | phage tail protein | - |
| ORU26_RS05005 (ORU26_05005) | - | 1048229..1051084 (+) | 2856 | WP_266200008.1 | phage tail protein | - |
| ORU26_RS05010 (ORU26_05010) | - | 1051095..1051859 (+) | 765 | WP_016533395.1 | hypothetical protein | - |
| ORU26_RS05015 (ORU26_05015) | - | 1051846..1052418 (+) | 573 | WP_071523714.1 | hypothetical protein | - |
| ORU26_RS05020 (ORU26_05020) | - | 1052415..1054016 (+) | 1602 | WP_266200009.1 | hypothetical protein | - |
| ORU26_RS05035 (ORU26_05035) | pgsA | 1055538..1056095 (-) | 558 | WP_005751628.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ORU26_RS05040 (ORU26_05040) | uvrC | 1056191..1058026 (-) | 1836 | WP_078737851.1 | excinuclease ABC subunit UvrC | - |
| ORU26_RS05045 (ORU26_05045) | kdsB | 1058051..1058827 (-) | 777 | WP_076090527.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ORU26_RS05050 (ORU26_05050) | - | 1058829..1059011 (-) | 183 | WP_076090529.1 | Trm112 family protein | - |
| ORU26_RS05055 (ORU26_05055) | lpxK | 1059023..1060000 (-) | 978 | WP_076090531.1 | tetraacyldisaccharide 4'-kinase | - |
| ORU26_RS05060 (ORU26_05060) | msbA | 1060032..1061780 (-) | 1749 | WP_078737852.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| ORU26_RS05065 (ORU26_05065) | rec2 | 1061833..1064226 (-) | 2394 | WP_164905894.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| ORU26_RS05070 (ORU26_05070) | dksA | 1064523..1064960 (+) | 438 | WP_005716860.1 | RNA polymerase-binding protein DksA | - |
| ORU26_RS05075 (ORU26_05075) | pcnB | 1065049..1066554 (+) | 1506 | WP_016533715.1 | polynucleotide adenylyltransferase PcnB | - |
Sequence
Protein
Download Length: 797 a.a. Molecular weight: 91190.58 Da Isoelectric Point: 9.8258
>NTDB_id=758173 ORU26_RS05065 WP_164905894.1 1061833..1064226(-) (rec2) [Pasteurella multocida strain PF10]
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
MKNALLSMSVVTVFSACSLLWLPEHFLLHWHITLLVFALLLVSIIICVLCGKNHWISPLIFVMSSVGILGYIHDQARQTL
LQADLVVQLPRKIETEFKIIEVLQQKNYQTFVVSAQLSPQQAKQKMILQWHAQEKAQIGEIWKGELRLRPISSRLNMGGF
DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLREGVKQTMQLEYQGLLLALAFGERAWLPTDIWQTYQKTSTAHVIAI
SGLHIGLAMGIGYFFIRLIQFLLPLKWVTPTLPIIVGLLFAWFYAELAGFSIPTSRAFFALTVVSWVKLWRRSYSVWQFF
LLVVALLLLGEPCMILSSSFWLSVGAVSVLMLWYQIFPLSLLHWRGKKITERPWRNCRWFFSLLHLQLGLLWLFTPVQLL
LFQGIALTSFMANVFVVPIYSVILIPLILLAVITQGAFSSWSIANTVAKYVTMLLTPLQSHWVVFSQQEILCLIAILALT
FIILIWYLYDFKKESLKCYAKVPRFFHLNQMRLLNPSLKWKTYLLAVGISLYCFLQILYKEISQPLWRLDTLDVGQGLAN
LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIELEQVILSHDDNDHVGGAETILKHYPQVKLMTASAQNYGKTDRT
FCEAGKTWTWQHLTFKALSPTKIVKRAKNTDSCVLLISDGSHHLLLTGDADIAAEKQFVNQLSQLDVLQVGHHGSKTSTG
YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTAVYNTGELGQISLLFHAKHIEIQTARTDFSPWYRRLIGL
Nucleotide
Download Length: 2394 bp
>NTDB_id=758173 ORU26_RS05065 WP_164905894.1 1061833..1064226(-) (rec2) [Pasteurella multocida strain PF10]
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
ATGAAAAACGCTCTTTTGTCAATGTCTGTTGTGACCGTATTCAGCGCATGTTCGTTACTTTGGCTACCTGAACATTTCTT
GCTTCATTGGCACATAACATTGTTAGTCTTCGCATTATTGCTAGTCAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC
ACTGGATTTCGCCTCTGATCTTTGTAATGAGTTCAGTAGGTATTTTAGGCTATATTCACGATCAAGCTCGTCAGACATTA
TTGCAAGCGGACTTGGTTGTTCAACTGCCTCGAAAGATAGAGACAGAATTTAAAATCATTGAAGTACTACAACAAAAAAA
CTATCAAACTTTTGTGGTTTCAGCACAATTATCTCCGCAACAAGCAAAACAAAAAATGATTCTTCAATGGCACGCGCAAG
AAAAGGCACAGATAGGGGAGATTTGGAAAGGAGAGCTACGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT
GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCAACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT
ATCTTGGCGAGAAAAATGGTTGCGAGAGGGAGTGAAACAGACCATGCAGCTGGAATATCAAGGGCTGTTACTTGCACTGG
CTTTTGGTGAACGGGCATGGTTACCCACAGACATTTGGCAAACTTATCAAAAAACCAGCACAGCACATGTGATTGCGATA
TCGGGTTTACATATTGGGCTTGCGATGGGAATAGGTTATTTCTTTATTCGTTTAATTCAGTTCCTATTGCCATTAAAGTG
GGTGACACCGACCTTGCCAATCATTGTTGGGCTTCTTTTTGCATGGTTTTATGCTGAGTTGGCGGGCTTTAGTATTCCAA
CATCACGCGCGTTTTTTGCTTTAACTGTCGTGTCGTGGGTAAAACTTTGGCGGCGTTCTTATTCTGTTTGGCAATTTTTT
TTATTAGTTGTTGCTTTGTTATTGCTAGGTGAACCATGTATGATTTTATCGAGCAGTTTCTGGCTGTCGGTTGGTGCTGT
GAGTGTATTAATGCTTTGGTATCAAATTTTTCCGCTGTCTTTATTACATTGGCGAGGAAAAAAGATCACAGAGCGTCCTT
GGCGCAACTGTCGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTGTGGCTTTTTACTCCCGTTCAATTATTG
CTTTTTCAGGGAATAGCTTTAACGAGCTTTATGGCGAATGTGTTTGTGGTGCCTATTTATAGTGTGATTTTAATACCATT
GATTTTATTGGCGGTGATCACTCAAGGGGCATTTTCCTCTTGGTCTATTGCAAATACTGTTGCGAAATACGTCACGATGC
TTTTAACTCCATTACAATCTCATTGGGTTGTATTCTCACAGCAGGAAATACTCTGCCTGATCGCGATCTTAGCTTTAACT
TTTATTATATTGATTTGGTATCTCTATGATTTTAAAAAAGAATCACTGAAGTGCTACGCTAAAGTACCACGTTTTTTTCA
TCTTAATCAAATGAGGCTGTTAAATCCGTCTTTAAAATGGAAAACTTATTTACTCGCTGTTGGCATCAGTCTTTACTGTT
TCTTACAGATACTTTATAAGGAGATATCTCAACCGCTTTGGCGTTTAGATACGCTCGATGTTGGACAAGGGTTAGCTAAC
TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCGGGAGGAAGTATGGCGGAACTGGAAAT
TATACCCTATTTACAAAGAGAGGGGATTGAGTTAGAACAGGTGATTTTAAGCCATGATGATAATGATCATGTTGGGGGCG
CGGAAACAATTCTAAAACATTACCCTCAAGTGAAGCTGATGACGGCGTCTGCTCAAAATTACGGAAAAACTGACCGCACT
TTTTGTGAAGCCGGTAAAACCTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAATAGTGAAGCGAGC
GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTCATCATCTCCTCTTAACTGGTGATGCAGATATTGCTG
CGGAAAAGCAGTTTGTGAATCAGTTAAGTCAACTTGATGTGTTACAAGTTGGACATCATGGCAGTAAAACGTCAACAGGG
TATGAACTTCTTTATCAAACACGACCAAAAATCGCACTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT
TCAGGTTGTACAACGACTTAAACGTTATCAAACGGCTGTATATAACACTGGTGAGTTAGGACAAATTAGCTTACTTTTTC
ATGCTAAACACATCGAAATTCAAACCGCAAGAACGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rec2 | Haemophilus influenzae Rd KW20 |
51.003 |
100 |
0.511 |