Detailed information NTG0075814

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: F7G76_RS24025
• Genome accession: NZ_AP024924
• Coordinates: 4799368..4800393 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O145:H28 strain 16003
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4794368..4805393

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7G76_RS24000 (EC16003_4616)	rraA	4794782..4795267 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
F7G76_RS24005 (EC16003_4617)	menA	4795360..4796286 (-)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
F7G76_RS24010 (EC16003_4618)	hslU	4796353..4797684 (-)	1332	WP_150389732.1	HslU--HslV peptidase ATPase subunit	-
F7G76_RS24015 (EC16003_4619)	hslV	4797694..4798224 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
F7G76_RS24020 (EC16003_4620)	ftsN	4798317..4799276 (-)	960	WP_000068838.1	cell division protein FtsN	-
F7G76_RS24025 (EC16003_4621)	cytR	4799368..4800393 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
F7G76_RS24030 (EC16003_4622)	priA	4800549..4802747 (-)	2199	WP_001400571.1	primosomal protein N'	Machinery gene
F7G76_RS24035 (EC16003_4623)	rpmE	4802950..4803162 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
F7G76_RS24040 (EC16003_4624)	yiiX	4803223..4803831 (-)	609	WP_000702305.1	YiiX family permuted papain-like enzyme	-
F7G76_RS24045 (EC16003_4625)	metJ	4803891..4804208 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=75814 F7G76_RS24025 WP_000644904.1 4799368..4800393(-) (cytR) [Escherichia coli O145:H28 strain 16003]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=75814 F7G76_RS24025 WP_000644904.1 4799368..4800393(-) (cytR) [Escherichia coli O145:H28 strain 16003]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCTCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGCCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628